| Basic Information | |
|---|---|
| Species | Arabidopsis lyrata |
| Cazyme ID | 490588 |
| Family | GT13 |
| Protein Properties | Length: 434 Molecular Weight: 49885.2 Isoelectric Point: 8.7083 |
| Chromosome | Chromosome/Scaffold: 7 Start: 54943 End: 58460 |
| Description | alpha-1,3-mannosyl-glycoprotein beta-1,2-N-acetylglucosaminyltransferase, putative |
| View CDS | |
| External Links |
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| NCBI Taxonomy |
| Plaza |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| GT13 | 22 | 425 | 0 |
| IQMRLFQTQSQYADRLGSAIESENHCTSQMRGLIDEVSIKQSQIVALQDMKNRQDQELVQLKDLIHTFEKKGIATLIEAGQMPVAAVVIMACSRADYLAR TVKSVLTYQSPVASKYPLFISQDGSDQAVKSKASSYNQLTYMQHLDFEPVITERPGELIAYYKIARHYKWALDQLFYKHKFSRVIILEDDMEIAPDFFDY FEAAANLMDRDKTIMAASSWNDNGQKQFVHDPSALYRSDFFPGLGWMLKRSTWDELSPKLKENHKGRQFIRPEVCRTYNFGEHGSSLGQFFSQYLEPIKL NDVKVDWKAKDLGYLTEGNYTKYFSGLVRQARPIQGADLVLKAQNIKGDVRIRYKDQAEFERIAGEFGIFEEWKDGVPRTAYKGVVVFRIQTTRRVFLVG PDSV | |||
| Full Sequence |
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| Protein Sequence Length: 434 Download |
| MARMSCDLRF LLIPAAFMFI YIQMRLFQTQ SQYADRLGSA IESENHCTSQ MRGLIDEVSI 60 KQSQIVALQD MKNRQDQELV QLKDLIHTFE KKGIATLIEA GQMPVAAVVI MACSRADYLA 120 RTVKSVLTYQ SPVASKYPLF ISQDGSDQAV KSKASSYNQL TYMQHLDFEP VITERPGELI 180 AYYKIARHYK WALDQLFYKH KFSRVIILED DMEIAPDFFD YFEAAANLMD RDKTIMAASS 240 WNDNGQKQFV HDPSALYRSD FFPGLGWMLK RSTWDELSPK LKENHKGRQF IRPEVCRTYN 300 FGEHGSSLGQ FFSQYLEPIK LNDVKVDWKA KDLGYLTEGN YTKYFSGLVR QARPIQGADL 360 VLKAQNIKGD VRIRYKDQAE FERIAGEFGI FEEWKDGVPR TAYKGVVVFR IQTTRRVFLV 420 GPDSVMQLGI RNS* 480 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| pfam13641 | Glyco_tranf_2_3 | 0.004 | 107 | 275 | 171 | + Glycosyltransferase like family 2. Members of this family of prokaryotic proteins include putative glucosyltransferase, which are involved in bacterial capsule biosynthesis. | ||
| cd02514 | GT13_GLCNAC-TI | 5.0e-169 | 105 | 424 | 336 | + GT13_GLCNAC-TI is involved in an essential step in the synthesis of complex or hybrid-type N-linked oligosaccharides. Alpha-1,3-mannosyl-glycoprotein beta-1,2-N-acetylglucosaminyltransferase (GLCNAC-T I , GNT-I) transfers N-acetyl-D-glucosamine from UDP to high-mannose glycoprotein N-oligosaccharide, an essential step in the synthesis of complex or hybrid-type N-linked oligosaccharides. The enzyme is an integral membrane protein localized to the Golgi apparatus. The catalytic domain is located at the C-terminus. These proteins are members of the glycosy transferase family 13. | ||
| pfam03071 | GNT-I | 0 | 13 | 432 | 437 | + GNT-I family. Alpha-1,3-mannosyl-glycoprotein beta-1,2-N-acetylglucosaminyltransferase (GNT-I, GLCNAC-T I) EC:2.4.1.101 transfers N-acetyl-D-glucosamine from UDP to high-mannose glycoprotein N-oligosaccharide. This is an essential step in the synthesis of complex or hybrid-type N-linked oligosaccharides. The enzyme is an integral membrane protein localised to the Golgi apparatus, and is probably distributed in all tissues. The catalytic domain is located at the C-terminus. | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0000139 | Golgi membrane |
| GO:0003827 | alpha-1,3-mannosylglycoprotein 2-beta-N-acetylglucosaminyltransferase activity |
| GO:0006487 | protein N-linked glycosylation |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| EMBL | CAB37480.1 | 0 | 1 | 430 | 1 | 454 | glycosyltransferase like protein (fragment) [Arabidopsis thaliana] |
| EMBL | CAB37564.1 | 0 | 1 | 433 | 1 | 457 | glycosyltransferase like protein [Arabidopsis thaliana] |
| EMBL | CAC80700.1 | 0 | 1 | 433 | 1 | 444 | N-acetylglucosaminyltransferase I [Arabidopsis thaliana] |
| EMBL | CBI29533.1 | 0 | 1 | 430 | 1 | 438 | unnamed protein product [Vitis vinifera] |
| RefSeq | NP_195537.2 | 0 | 1 | 433 | 1 | 444 | CGL1 (COMPLEX GLYCAN LESS 1); alpha-1,3-mannosylglycoprotein 2-beta-N-acetylglucosaminyltransferase/ protein N-acetylglucosaminyltransferase/ transferase, transferring glycosyl groups [Arabidopsis thaliana] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 1foa_A | 0 | 102 | 424 | 5 | 339 | A Chain A, Crystal Structure Of N-acetylglucosaminyltransferase I |
| PDB | 1fo9_A | 0 | 102 | 424 | 5 | 339 | A Chain A, Crystal Structure Of N-acetylglucosaminyltransferase I |
| PDB | 1fo8_A | 0 | 103 | 424 | 1 | 334 | A Chain A, Crystal Structure Of N-Acetylglucosaminyltransferase I |
| PDB | 2apc_A | 0 | 105 | 424 | 2 | 333 | A Chain A, Crystal Structure Of N-Acetylglucosaminyltransferase I |
| PDB | 2am5_A | 0 | 105 | 424 | 2 | 333 | A Chain A, Crystal Structure Of N-Acetylglucosaminyltransferase I |
| Hydropathy |
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| EST Download unfiltered results here | ||||
|---|---|---|---|---|
| Hit | Length | Start | End | EValue |
| EX035232 | 286 | 36 | 310 | 0 |
| BX839862 | 328 | 1 | 317 | 0 |
| EX085951 | 267 | 1 | 267 | 0 |
| GR451785 | 260 | 1 | 260 | 0 |
| EH731153 | 290 | 152 | 430 | 0 |
| Sequence Alignments (This image is cropped. Click for full image.) |
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| Phylogeny |
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