Basic Information | |
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Species | Arabidopsis lyrata |
Cazyme ID | 490628 |
Family | GH10 |
Protein Properties | Length: 563 Molecular Weight: 63819.2 Isoelectric Point: 6.3838 |
Chromosome | Chromosome/Scaffold: 7 Start: 184995 End: 187760 |
Description | Glycosyl hydrolase family 10 protein |
View CDS |
External Links |
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NCBI Taxonomy |
Plaza |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GH10 | 217 | 477 | 0 |
SKDFPIGSAISKTILGNIPYQEWFVKRFDATVFENELKWYATEPDQGKLNYTLADKMMNFVRANRIIARGHNIFWEDPKYNPNWVRNLSGEDLRSAVNRR IKSLMTRYRGEFVHWDVSNEMLHFDFYESRLGKNASYGFFAAAREIDSLATLFFNDFNVVETCSDEKSTVDEYIARVRELQRYDGIRMDGIGLEGHFTTP NVALMRAIIDKLATLQLPIWLTEIDISSSLDHRTQAIYLEQVLREGFSHPSVNGIMLWTAL |
Full Sequence |
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Protein Sequence Length: 563 Download |
MKYSYMYCLI FLALSLLTAF TPASSSNGLD GPFYDSTAYT ECRAEAEKPL YNGGMLKDQK 60 PSVSGRDSLT GIGARYTPTY ILHNLTQNTI YCFSIWVKIE AGAASARVRA RLRADNATLN 120 CVGSVTAKHG CWSFLKGGFL LDSPCNQSIL FFETSNDDSK IQLQVASASL QPFTQEQWRN 180 IQDYFINTAR KRAVTIHVSE ENGESVEGAE VTVEQISKDF PIGSAISKTI LGNIPYQEWF 240 VKRFDATVFE NELKWYATEP DQGKLNYTLA DKMMNFVRAN RIIARGHNIF WEDPKYNPNW 300 VRNLSGEDLR SAVNRRIKSL MTRYRGEFVH WDVSNEMLHF DFYESRLGKN ASYGFFAAAR 360 EIDSLATLFF NDFNVVETCS DEKSTVDEYI ARVRELQRYD GIRMDGIGLE GHFTTPNVAL 420 MRAIIDKLAT LQLPIWLTEI DISSSLDHRT QAIYLEQVLR EGFSHPSVNG IMLWTALHPN 480 GCYQMCLTDD KFRNLPAGDM VDQKLLEWKT REVKATTDDH GSFSFFGFLG EYRVGIVYQG 540 KTVNSSFSLS QGPETKHVRL QI* |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
COG3693 | XynA | 2.0e-37 | 215 | 443 | 244 | + Beta-1,4-xylanase [Carbohydrate transport and metabolism] | ||
pfam00331 | Glyco_hydro_10 | 6.0e-55 | 214 | 474 | 278 | + Glycosyl hydrolase family 10. | ||
smart00633 | Glyco_10 | 3.0e-78 | 253 | 501 | 270 | + Glycosyl hydrolase family 10. |
Gene Ontology | |
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GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0005975 | carbohydrate metabolic process |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1nq6_A | 2e-27 | 222 | 474 | 15 | 268 | A Chain A, Crystal Structure Of The Catalytic Domain Of Xylanase A From Streptomyces Halstedii Jm8 |
PDB | 1tux_A | 6e-26 | 244 | 505 | 40 | 301 | A Chain A, High Resolution Crystal Structure Of A Thermostable Xylanase From Thermoascus Aurantiacus |
PDB | 2g4f_B | 2e-25 | 223 | 445 | 17 | 242 | A Chain A, High Resolution Crystal Structure Of A Thermostable Xylanase From Thermoascus Aurantiacus |
PDB | 2g4f_A | 2e-25 | 223 | 445 | 17 | 242 | A Chain A, High Resolution Crystal Structure Of A Thermostable Xylanase From Thermoascus Aurantiacus |
PDB | 2g3j_A | 2e-25 | 223 | 445 | 17 | 242 | A Chain A, High Resolution Crystal Structure Of A Thermostable Xylanase From Thermoascus Aurantiacus |