| Basic Information | |
|---|---|
| Species | Arabidopsis lyrata |
| Cazyme ID | 491906 |
| Family | AA3 |
| Protein Properties | Length: 749 Molecular Weight: 81892.4 Isoelectric Point: 7.4156 |
| Chromosome | Chromosome/Scaffold: 7 Start: 5700342 End: 5703063 |
| Description | Long-chain fatty alcohol dehydrogenase family protein |
| View CDS | |
| External Links |
|---|
| NCBI Taxonomy |
| Plaza |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| AA3 | 233 | 739 | 8.26766e-44 |
| VHRIRCDAVVVGSGSGGGVAAANLAKAGFKVLVLEKGNYFAPQDYSGLEGPSMLELYEKSGLLTTVDGKFMLLAGSTVGGGTAVNWSASIRTPDHVLQEW SEGSKIKFFGSQEYQSAMDEVMTRIGVTERCVKDGFQNQVLRKGCERLGLQVESVPRNSPEDHYCGLCGYGCRAGAKNGTDRTWLVDAVENGAVILTGIK AERFVLVDNTSSSNERKKRCVGVIASSVGGKIGKKFIIEARMTASSAGSLLTPPLMLSSGLKNPNIGRNLKLHPVLMTWGYFPEKDSEFSGKMYEGGIIT SVHHMNDAESGCRAILENPLIGPASYAGLSPWVSGADLKERMIKYGRTAHVFALVRDIGSGEVMKESEVTYRTTKKDRENLRAGLRQALRVSVAAGAVEV GTYRSDGQRMKCEGITKEAMEEFLDEVDAVGGVSTKGEYWTTYFSAHQMGSCRMGATAEEGALDEIGESWEAEGLFVCDGSVLPSAVGVNPMITIQSTAY CISSKIV | |||
| Full Sequence |
|---|
| Protein Sequence Length: 749 Download |
| MEEDRRRNRG HPLLRSMKRE DGYNHGFSPS QIQSLAVICQ TLLPPETTAE QQALNSFNVA 60 SSTQPPFTEE VAEMIVKNGR SEAVKVLKII LIILSFRFGT LLLCGSLCLD KSWPFVLKFS 120 QLPLDKREEI LRKWSRQSGF LLPFRITFFL AKFYTLFYFF SQTDENLKNP ALETIGYCLD 180 GIETSSNKKS EADKRRRPLE TGIIETTHES DVTITQSLIG KGVHVARDDG DNVHRIRCDA 240 VVVGSGSGGG VAAANLAKAG FKVLVLEKGN YFAPQDYSGL EGPSMLELYE KSGLLTTVDG 300 KFMLLAGSTV GGGTAVNWSA SIRTPDHVLQ EWSEGSKIKF FGSQEYQSAM DEVMTRIGVT 360 ERCVKDGFQN QVLRKGCERL GLQVESVPRN SPEDHYCGLC GYGCRAGAKN GTDRTWLVDA 420 VENGAVILTG IKAERFVLVD NTSSSNERKK RCVGVIASSV GGKIGKKFII EARMTASSAG 480 SLLTPPLMLS SGLKNPNIGR NLKLHPVLMT WGYFPEKDSE FSGKMYEGGI ITSVHHMNDA 540 ESGCRAILEN PLIGPASYAG LSPWVSGADL KERMIKYGRT AHVFALVRDI GSGEVMKESE 600 VTYRTTKKDR ENLRAGLRQA LRVSVAAGAV EVGTYRSDGQ RMKCEGITKE AMEEFLDEVD 660 AVGGVSTKGE YWTTYFSAHQ MGSCRMGATA EEGALDEIGE SWEAEGLFVC DGSVLPSAVG 720 VNPMITIQST AYCISSKIVD SLQSKRKV* |
| Functional Domains Download unfiltered results here | ||||||
|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description |
| TIGR03970 | Rv0697 | 0.0007 | 600 | 727 | 129 | + dehydrogenase, Rv0697 family. This model describes a set of dehydrogenases belonging to the glucose-methanol-choline oxidoreductase (GMC oxidoreductase) family. Members of the present family are restricted to Actinobacterial genome contexts containing also members of families TIGR03962 and TIGR03969 (the mycofactocin system), and are proposed to be uniform in function. |
| pfam05199 | GMC_oxred_C | 3.0e-19 | 600 | 734 | 135 | + GMC oxidoreductase. This domain found associated with pfam00732. |
| COG2303 | BetA | 3.0e-30 | 256 | 727 | 540 | + Choline dehydrogenase and related flavoproteins [Amino acid transport and metabolism] |
| pfam00732 | GMC_oxred_N | 1.0e-90 | 285 | 507 | 226 | + GMC oxidoreductase. This family of proteins bind FAD as a cofactor. |
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0016614 | oxidoreductase activity, acting on CH-OH group of donors |
| GO:0050660 | flavin adenine dinucleotide binding |
| GO:0055114 | oxidation-reduction process |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | AAK64154.1 | 0 | 1 | 748 | 1 | 748 | unknown protein [Arabidopsis thaliana] |
| GenBank | AAM63097.1 | 0 | 1 | 748 | 1 | 748 | unknown [Arabidopsis thaliana] |
| GenBank | ACF22878.1 | 0 | 23 | 742 | 1 | 716 | alcohol oxidase [Glycine max] |
| RefSeq | NP_194586.1 | 0 | 1 | 748 | 1 | 748 | alcohol oxidase-related [Arabidopsis thaliana] |
| RefSeq | XP_002529832.1 | 0 | 11 | 743 | 8 | 742 | electron carrier, putative [Ricinus communis] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 3cox_A | 0.00000005 | 229 | 741 | 8 | 504 | B Chain B, The Avrptob-Bak1 Complex Reveals Two Structurally Similar Kinaseinteracting Domains In A Single Type Iii Effector |
| PDB | 1coy_A | 0.00000005 | 229 | 741 | 8 | 504 | A Chain A, Crystal Structure Of Cholesterol Oxidase Complexed With A Steroid Substrate. Implications For Fad Dependent Alcohol Oxidases |
| PDB | 3nne_H | 0.0002 | 427 | 746 | 226 | 530 | A Chain A, Crystal Structure Of Choline Oxidase S101a Mutant |
| PDB | 3nne_G | 0.0002 | 427 | 746 | 226 | 530 | A Chain A, Crystal Structure Of Choline Oxidase S101a Mutant |
| PDB | 3nne_F | 0.0002 | 427 | 746 | 226 | 530 | A Chain A, Crystal Structure Of Choline Oxidase S101a Mutant |
