| Basic Information | |
|---|---|
| Species | Arabidopsis lyrata |
| Cazyme ID | 492307 |
| Family | AA1 |
| Protein Properties | Length: 586 Molecular Weight: 65398.2 Isoelectric Point: 8.1786 |
| Chromosome | Chromosome/Scaffold: 7 Start: 7240806 End: 7244251 |
| Description | SKU5 similar 1 |
| View CDS | |
| External Links |
|---|
| NCBI Taxonomy |
| Plaza |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| AA1 | 44 | 512 | 0 |
| QQVIAVNGQFPGPLLNATTNYNVVVNVFNHLDEPLLLTWPGIQMRRNSWQDGVLGTNCPIPPRWNFTYQFQVKDQIGSFFYSPSLNFQRASGGFGPIVIN NRDIIPIPFPQPDGELIFIIGDWYTQDHKALRRILDSGKELGMPDGVLINGKGPYKYNSSVPDGIDYLTFHVEPGKTYRIRVHNVGISTSLNFRIQNHNL LLVETEGHYTSQANFTDFDVHVGQSYSFLVTMDQNATSDYYIVASARFVNETVWQRVTGVAILHYSNSKGPVSGPLPVPKTDVSSPWSAMNQPKAIRQNT SASGARPNPQGSFHYGQINITNTYILRSLPPTTINGALRATLNGISFVNPSTPVRLADRNKVKGAYKLDFPDRPFSRPPRLDRSMINATYKGFIQVIFQN NDTKIQSFHVDGYSFFVVGMDFGIWSEDKKGSYNNYDAISRSTIKVYPGGWTAVLISLDNVGVWNIRVE | |||
| Full Sequence |
|---|
| Protein Sequence Length: 586 Download |
| MAATCSVFLL CFALLSGVSF AADPFVSYDF RVSYITASPL GVPQQVIAVN GQFPGPLLNA 60 TTNYNVVVNV FNHLDEPLLL TWPGIQMRRN SWQDGVLGTN CPIPPRWNFT YQFQVKDQIG 120 SFFYSPSLNF QRASGGFGPI VINNRDIIPI PFPQPDGELI FIIGDWYTQD HKALRRILDS 180 GKELGMPDGV LINGKGPYKY NSSVPDGIDY LTFHVEPGKT YRIRVHNVGI STSLNFRIQN 240 HNLLLVETEG HYTSQANFTD FDVHVGQSYS FLVTMDQNAT SDYYIVASAR FVNETVWQRV 300 TGVAILHYSN SKGPVSGPLP VPKTDVSSPW SAMNQPKAIR QNTSASGARP NPQGSFHYGQ 360 INITNTYILR SLPPTTINGA LRATLNGISF VNPSTPVRLA DRNKVKGAYK LDFPDRPFSR 420 PPRLDRSMIN ATYKGFIQVI FQNNDTKIQS FHVDGYSFFV VGMDFGIWSE DKKGSYNNYD 480 AISRSTIKVY PGGWTAVLIS LDNVGVWNIR VENLDRWYLG EETYMRITNP DEDGKTEMDP 540 PDNVLYCGAL KNLQKEQHHS AATSILNGRL KLMLMVLLAS VMTFC* 600 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| PLN02991 | PLN02991 | 8.0e-177 | 4 | 562 | 560 | + oxidoreductase | ||
| PLN00044 | PLN00044 | 0 | 12 | 578 | 576 | + multi-copper oxidase-related protein; Provisional | ||
| PLN02354 | PLN02354 | 0 | 6 | 561 | 560 | + copper ion binding / oxidoreductase | ||
| PLN02168 | PLN02168 | 0 | 6 | 548 | 557 | + copper ion binding / pectinesterase | ||
| PLN02835 | PLN02835 | 0 | 7 | 548 | 545 | + oxidoreductase | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0005507 | copper ion binding |
| GO:0016491 | oxidoreductase activity |
| GO:0055114 | oxidation-reduction process |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| EMBL | CAA23065.1 | 0 | 1 | 555 | 1 | 558 | Pollen-specific protein precursor like [Arabidopsis thaliana] |
| RefSeq | NP_194254.2 | 0 | 1 | 585 | 1 | 589 | SKS1 (SKU5 SIMILAR 1); copper ion binding / oxidoreductase [Arabidopsis thaliana] |
| RefSeq | NP_199961.1 | 0 | 14 | 585 | 16 | 592 | SKS2 (SKU5 SIMILAR 2); copper ion binding / oxidoreductase [Arabidopsis thaliana] |
| RefSeq | XP_002318885.1 | 0 | 8 | 585 | 13 | 591 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002510943.1 | 0 | 9 | 584 | 11 | 591 | multicopper oxidase, putative [Ricinus communis] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 1asq_B | 0 | 28 | 520 | 6 | 516 | A Chain A, Arabidopsis Thaliana Peroxidase N |
| PDB | 1asq_A | 0 | 28 | 520 | 6 | 516 | A Chain A, Arabidopsis Thaliana Peroxidase N |
| PDB | 1asp_B | 0 | 28 | 520 | 6 | 516 | A Chain A, Arabidopsis Thaliana Peroxidase N |
| PDB | 1asp_A | 0 | 28 | 520 | 6 | 516 | A Chain A, Arabidopsis Thaliana Peroxidase N |
| PDB | 1aso_B | 0 | 28 | 520 | 6 | 516 | A Chain A, Arabidopsis Thaliana Peroxidase N |
