| Basic Information | |
|---|---|
| Species | Arabidopsis lyrata |
| Cazyme ID | 493370 |
| Family | GH14 |
| Protein Properties | Length: 500 Molecular Weight: 56115.5 Isoelectric Point: 4.8783 |
| Chromosome | Chromosome/Scaffold: 7 Start: 13235441 End: 13238621 |
| Description | beta-amylase 5 |
| View CDS | |
| External Links |
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| NCBI Taxonomy |
| Plaza |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| GH14 | 17 | 437 | 0 |
| YVMLPLGVVNVDNVFADPETLETQLKRLKEEAGVDGVMVDVWWGIIESKGPKQYDWTAYKTLFQLIARLGLKIQAIMSFHQCGGNVGDIVTIPIPQWVRD VGDNDPDIYYTNRKGTRDIEYLSIGVDNLPLFAGRTAVQIYSDYMSSFKENMADLIEAGAIVDIEVGLGPAGELRYPSYPQSQGWVFPGIGEFQCYDKYL KKDFKEAAAKAGHPEWDLPEDAGEYNDKPEDTGFFKRNGTYVSEEGKFFLTWYSNKLIFHGDQIIGEANKIFAGLKVNLAAKVSGIHWLYNHHSHAAELT AGYYNLFKRDGYRPIARMLSKHYGILNFTCLEMKDTDNTAEALSAPQELVQEVLSKAWKEGIEVAGENALETYGAKGYNQILLNARPNGVNPNGKPKLRM YGFTYLRLSDTVFQEDNFELF | |||
| Full Sequence |
|---|
| Protein Sequence Length: 500 Download |
| MAANYNEKLL LNYVPVYVML PLGVVNVDNV FADPETLETQ LKRLKEEAGV DGVMVDVWWG 60 IIESKGPKQY DWTAYKTLFQ LIARLGLKIQ AIMSFHQCGG NVGDIVTIPI PQWVRDVGDN 120 DPDIYYTNRK GTRDIEYLSI GVDNLPLFAG RTAVQIYSDY MSSFKENMAD LIEAGAIVDI 180 EVGLGPAGEL RYPSYPQSQG WVFPGIGEFQ CYDKYLKKDF KEAAAKAGHP EWDLPEDAGE 240 YNDKPEDTGF FKRNGTYVSE EGKFFLTWYS NKLIFHGDQI IGEANKIFAG LKVNLAAKVS 300 GIHWLYNHHS HAAELTAGYY NLFKRDGYRP IARMLSKHYG ILNFTCLEMK DTDNTAEALS 360 APQELVQEVL SKAWKEGIEV AGENALETYG AKGYNQILLN ARPNGVNPNG KPKLRMYGFT 420 YLRLSDTVFQ EDNFELFKKL VRKMHADQDN YCGDAAKYGH EIVPLKTPNS QLTVEDIADA 480 AQPSGAFKWD SETDMKVDG* 540 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| PLN02705 | PLN02705 | 2.0e-119 | 13 | 451 | 442 | + beta-amylase | ||
| PLN02905 | PLN02905 | 5.0e-152 | 13 | 447 | 439 | + beta-amylase | ||
| PLN00197 | PLN00197 | 2.0e-152 | 14 | 449 | 440 | + beta-amylase; Provisional | ||
| PLN02803 | PLN02803 | 3.0e-168 | 14 | 444 | 434 | + beta-amylase | ||
| PLN02801 | PLN02801 | 0 | 1 | 499 | 499 | + beta-amylase | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0000272 | polysaccharide catabolic process |
| GO:0016161 | beta-amylase activity |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| DDBJ | BAA07842.1 | 0 | 1 | 499 | 1 | 498 | beta-amylase [Arabidopsis thaliana] |
| DDBJ | BAH20736.1 | 0 | 1 | 499 | 1 | 498 | beta-amylase [Raphanus sativus] |
| EMBL | CAB10300.1 | 0 | 1 | 499 | 1 | 499 | beta-amylase [Arabidopsis thaliana] |
| RefSeq | NP_567460.1 | 0 | 1 | 499 | 1 | 498 | BAM5 (BETA-AMYLASE 5); beta-amylase [Arabidopsis thaliana] |
| RefSeq | NP_849389.1 | 0 | 1 | 410 | 1 | 410 | BAM5 (BETA-AMYLASE 5); beta-amylase [Arabidopsis thaliana] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 1wdp_A | 0 | 3 | 499 | 1 | 495 | A Chain A, Crystal Structure Of Folylpolyglutamate Synthase (Tm0166) From Thermotoga Maritima At 2.10 A Resolution |
| PDB | 1q6c_A | 0 | 3 | 499 | 1 | 495 | A Chain A, Crystal Structure Of Soybean Beta-Amylase Complexed With Maltose |
| PDB | 1bfn_A | 0 | 3 | 499 | 1 | 495 | A Chain A, Crystal Structure Of Soybean Beta-Amylase Complexed With Maltose |
| PDB | 1uko_D | 0 | 3 | 499 | 1 | 495 | A Chain A, Crystal Structure Of Soybean Beta-Amylase Mutant Substituted At Surface Region |
| PDB | 1uko_C | 0 | 3 | 499 | 1 | 495 | A Chain A, Crystal Structure Of Soybean Beta-Amylase Mutant Substituted At Surface Region |
| Hydropathy |
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| EST Download unfiltered results here | ||||
|---|---|---|---|---|
| Hit | Length | Start | End | EValue |
| HO777976 | 497 | 5 | 500 | 0 |
| HO803971 | 397 | 93 | 489 | 0 |
| EG522849 | 282 | 213 | 494 | 0 |
| CK121669 | 247 | 114 | 360 | 0 |
| EE565622 | 256 | 81 | 336 | 0 |
| Sequence Alignments (This image is cropped. Click for full image.) |
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