Basic Information | |
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Species | Arabidopsis lyrata |
Cazyme ID | 493908 |
Family | GT92 |
Protein Properties | Length: 581 Molecular Weight: 66317 Isoelectric Point: 9.7495 |
Chromosome | Chromosome/Scaffold: 7 Start: 22047597 End: 22049687 |
Description | Domain of unknown function (DUF23) |
View CDS |
External Links |
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NCBI Taxonomy |
Plaza |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GT92 | 275 | 488 | 5.9e-22 |
FETCVCTMTRNAANVLREWVIYHAGIGVQRWFIYDNNSDDDIVSEIKNLENRGYNISRHFWPWIKTQEAGFASCAIRAKSDCDWVAFIDVDEFFYIPSGQ TLTDVIRNHTTSSGEIGEIRTPCHSFGPSGLSDPPGGGVTAAYTCRMALPERHKSIIRPESLNATLINVVHHFHLKEGFAFADVDKGMMVINHYKYQVWE IFKEKFKRRVATYV |
Full Sequence |
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Protein Sequence Length: 581 Download |
MKNRRKRGGL SGGDVVVSWR RFFRFVSLFV FSFVLFSALF IFFGKIRPVV RSSVNAVLRG 60 SVPAVKVVTI HEAVEFPDQT LIFLKYPPYS RLFTKEDLFC VFSDVNDSSK LFKELPYAVE 120 TDDYGRHIVR CSAVPRGNTV SLAVSRWTVD NSNLQVGLTH RWDWLVYDAV IDDDNSTVVF 180 VKGLNLRPGK VADVSRYECV YGWDFTKPKL LLRAQVISAA QEIVRCKTPL TVLDGPRKAQ 240 SQPVKVSVRI KGSGMLPSVA HPIKRPGRVK DTKTFETCVC TMTRNAANVL REWVIYHAGI 300 GVQRWFIYDN NSDDDIVSEI KNLENRGYNI SRHFWPWIKT QEAGFASCAI RAKSDCDWVA 360 FIDVDEFFYI PSGQTLTDVI RNHTTSSGEI GEIRTPCHSF GPSGLSDPPG GGVTAAYTCR 420 MALPERHKSI IRPESLNATL INVVHHFHLK EGFAFADVDK GMMVINHYKY QVWEIFKEKF 480 KRRVATYVAD WQNEENVGSK DRAPGLGTRP VEPSDWAERF CEVRDIGLRD WVLDNFRDRK 540 TQRLVWEREA RRVEDEVIVQ MGSWADKRVG RKRKKQLKAQ * |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
cd00761 | Glyco_tranf_GTA_type | 0.005 | 279 | 365 | 89 | + Glycosyltransferase family A (GT-A) includes diverse families of glycosyl transferases with a common GT-A type structural fold. Glycosyltransferases (GTs) are enzymes that synthesize oligosaccharides, polysaccharides, and glycoconjugates by transferring the sugar moiety from an activated nucleotide-sugar donor to an acceptor molecule, which may be a growing oligosaccharide, a lipid, or a protein. Based on the stereochemistry of the donor and acceptor molecules, GTs are classified as either retaining or inverting enzymes. To date, all GT structures adopt one of two possible folds, termed GT-A fold and GT-B fold. This hierarchy includes diverse families of glycosyl transferases with a common GT-A type structural fold, which has two tightly associated beta/alpha/beta domains that tend to form a continuous central sheet of at least eight beta-strands. The majority of the proteins in this superfamily are Glycosyltransferase family 2 (GT-2) proteins. But it also includes families GT-43, GT-6, GT-8, GT13 and GT-7; which are evolutionarily related to GT-2 and share structure similarities. | ||
pfam13704 | Glyco_tranf_2_4 | 5.0e-11 | 284 | 373 | 91 | + Glycosyl transferase family 2. Members of this family of prokaryotic proteins include putative glucosyltransferases, | ||
pfam01697 | Glyco_transf_92 | 2.0e-38 | 273 | 479 | 233 | + Glycosyltransferase family 92. Members of this family act as galactosyltransferases, belonging to glycosyltransferase family 92. The aligned region contains several conserved cysteine residues and several charged residues that may be catalytic residues. This is supported by the inclusion of this family in the GT-A glycosyl transferase superfamily. |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | AAL08261.1 | 0 | 1 | 580 | 1 | 583 | AT5g40720/MNF13_240 [Arabidopsis thaliana] |
DDBJ | BAA95709.1 | 0 | 44 | 577 | 44 | 577 | unnamed protein product [Arabidopsis thaliana] |
RefSeq | NP_189369.1 | 0 | 44 | 569 | 44 | 568 | zinc finger (C3HC4-type RING finger) family protein [Arabidopsis thaliana] |
RefSeq | NP_198888.1 | 0 | 1 | 580 | 1 | 583 | unknown protein [Arabidopsis thaliana] |
RefSeq | XP_002300081.1 | 0 | 1 | 551 | 1 | 556 | predicted protein [Populus trichocarpa] |