CAZyme Information

Basic Information
SpeciesArabidopsis lyrata
Cazyme ID493908
FamilyGT92
Protein PropertiesLength: 581 Molecular Weight: 66317 Isoelectric Point: 9.7495
ChromosomeChromosome/Scaffold: 7 Start: 22047597 End: 22049687
DescriptionDomain of unknown function (DUF23)
View CDS
External Links
NCBI Taxonomy
Plaza
CAZyDB
Signature Domain  Download full data set without filtering
FamilyStartEndEvalue
GT922754885.9e-22
  FETCVCTMTRNAANVLREWVIYHAGIGVQRWFIYDNNSDDDIVSEIKNLENRGYNISRHFWPWIKTQEAGFASCAIRAKSDCDWVAFIDVDEFFYIPSGQ
  TLTDVIRNHTTSSGEIGEIRTPCHSFGPSGLSDPPGGGVTAAYTCRMALPERHKSIIRPESLNATLINVVHHFHLKEGFAFADVDKGMMVINHYKYQVWE
  IFKEKFKRRVATYV
Full Sequence
Protein Sequence     Length: 581     Download
MKNRRKRGGL SGGDVVVSWR RFFRFVSLFV FSFVLFSALF IFFGKIRPVV RSSVNAVLRG    60
SVPAVKVVTI HEAVEFPDQT LIFLKYPPYS RLFTKEDLFC VFSDVNDSSK LFKELPYAVE    120
TDDYGRHIVR CSAVPRGNTV SLAVSRWTVD NSNLQVGLTH RWDWLVYDAV IDDDNSTVVF    180
VKGLNLRPGK VADVSRYECV YGWDFTKPKL LLRAQVISAA QEIVRCKTPL TVLDGPRKAQ    240
SQPVKVSVRI KGSGMLPSVA HPIKRPGRVK DTKTFETCVC TMTRNAANVL REWVIYHAGI    300
GVQRWFIYDN NSDDDIVSEI KNLENRGYNI SRHFWPWIKT QEAGFASCAI RAKSDCDWVA    360
FIDVDEFFYI PSGQTLTDVI RNHTTSSGEI GEIRTPCHSF GPSGLSDPPG GGVTAAYTCR    420
MALPERHKSI IRPESLNATL INVVHHFHLK EGFAFADVDK GMMVINHYKY QVWEIFKEKF    480
KRRVATYVAD WQNEENVGSK DRAPGLGTRP VEPSDWAERF CEVRDIGLRD WVLDNFRDRK    540
TQRLVWEREA RRVEDEVIVQ MGSWADKRVG RKRKKQLKAQ * 
Functional Domains Download unfiltered results here
Cdd IDDomainE-ValueStartEndLengthDomain Description
cd00761Glyco_tranf_GTA_type0.00527936589+
pfam13704Glyco_tranf_2_45.0e-1128437391+
pfam01697Glyco_transf_922.0e-38273479233+
Annotations - NR Download unfiltered results here
SourceHit IDE-ValueQuery StartQuery EndHit StartHit EndDescription
GenBankAAL08261.1015801583AT5g40720/MNF13_240 [Arabidopsis thaliana]
DDBJBAA95709.104457744577unnamed protein product [Arabidopsis thaliana]
RefSeqNP_189369.104456944568zinc finger (C3HC4-type RING finger) family protein [Arabidopsis thaliana]
RefSeqNP_198888.1015801583unknown protein [Arabidopsis thaliana]
RefSeqXP_002300081.1015511556predicted protein [Populus trichocarpa]
Transmembrane Domains
StartEnd
2143
Hydropathy
EST Download unfiltered results here
HitLengthStartEndEValue
GR4547942622435010
GO8657763192375460
BX8361221314165460
BX8361221262733980
AV8231462152734870
Orthologous Group
SpeciesID
Aquilegia coeruleaAquca_025_00172.1Aquca_002_00375.1
Arabidopsis lyrata484521
Arabidopsis thalianaAT5G40720.1
Brachypodium distachyonBradi3g14080.1
Brassica rapaBra028472Bra025268
Carica papayaevm.model.supercontig_5.316
Citrus clementinaCiclev10030976m
Citrus sinensisorange1.1g043544morange1.1g037991m
Cucumis sativusCucsa.136130.1
Eucalyptus grandisEucgr.B03384.1
Glycine maxGlyma02g03040.1Glyma01g04515.1Glyma08g40440.1
Gossypium raimondiiGorai.009G345800.1Gorai.006G037600.1
Manihot esculentacassava4.1_034265mcassava4.1_007462m
Mimulus guttatusmgv1a001120mmgv1a003136m
Panicum virgatumPavirv00056779m
Phaseolus vulgarisPhvul.008G147000.1Phvul.002G078300.1
Ricinus communis29736.m002092
Selaginella moellendorffii102746
Sorghum bicolorSb07g002140.1
Vitis viniferaGSVIVT01003965001
Sequence Alignments  (This image is cropped. Click for full image.)
Phylogeny