| Basic Information | |
|---|---|
| Species | Arabidopsis lyrata |
| Cazyme ID | 494762 |
| Family | GH17 |
| Protein Properties | Length: 436 Molecular Weight: 46669.5 Isoelectric Point: 7.6157 |
| Chromosome | Chromosome/Scaffold: 8 Start: 5972687 End: 5975952 |
| Description | Glycosyl hydrolase family 17 protein |
| View CDS | |
| External Links |
|---|
| NCBI Taxonomy |
| Plaza |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| GH17 | 26 | 344 | 0 |
| LGINYGLTADNLPPPSASAKLLQSTTFQKVRLYGSDPAVIKALANTGIEIVIGASNGDVPGLASDPSFARSWVQTNVVPYYPASKIVLIAVGNEITTFGD NNLMSQLLPAMKNVQSALEAVSLGGGKIKVSTVHVMSVLAGSDPPSAAVFKPEHADILKGLLEFNSETGSPFAVNPYPFFAYQDDRRPETLAYCLFQPNP GRVDPKSNLKYMNMFDAQVDAVYSALNSIGFKDVEIVVAETGWPYKGDPDEAGATVENARAYNKNLIAHLKSGSGTPLMPGRVIDTYLFALYDENLKPGK GSERAFGLFRPDLTMTYDI | |||
| Full Sequence |
|---|
| Protein Sequence Length: 436 Download |
| MIASVYSLIL LFFSCLVHLS KSQPFLGINY GLTADNLPPP SASAKLLQST TFQKVRLYGS 60 DPAVIKALAN TGIEIVIGAS NGDVPGLASD PSFARSWVQT NVVPYYPASK IVLIAVGNEI 120 TTFGDNNLMS QLLPAMKNVQ SALEAVSLGG GKIKVSTVHV MSVLAGSDPP SAAVFKPEHA 180 DILKGLLEFN SETGSPFAVN PYPFFAYQDD RRPETLAYCL FQPNPGRVDP KSNLKYMNMF 240 DAQVDAVYSA LNSIGFKDVE IVVAETGWPY KGDPDEAGAT VENARAYNKN LIAHLKSGSG 300 TPLMPGRVID TYLFALYDEN LKPGKGSERA FGLFRPDLTM TYDIGLTKTT NNQTSMAPVS 360 PTTPRLPPAA APTRQTLPAP PQMILPSPVT PSHKNSGQTD VHNSTPRSAS LAHICRSLSI 420 STSMLFLSVL YALII* |
| Functional Domains Download unfiltered results here | ||||||
|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description |
| COG5309 | COG5309 | 3.0e-8 | 25 | 337 | 328 | + Exo-beta-1,3-glucanase [Carbohydrate transport and metabolism] |
| pfam00332 | Glyco_hydro_17 | 3.0e-101 | 26 | 344 | 319 | + Glycosyl hydrolases family 17. |
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
| GO:0005975 | carbohydrate metabolic process |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| DDBJ | BAB10628.1 | 0 | 1 | 331 | 1 | 331 | beta-1,3-glucanase-like protein [Arabidopsis thaliana] |
| RefSeq | NP_199086.2 | 0 | 1 | 417 | 1 | 418 | glycosyl hydrolase family 17 protein [Arabidopsis thaliana] |
| RefSeq | XP_002282736.1 | 0 | 2 | 384 | 6 | 384 | PREDICTED: hypothetical protein [Vitis vinifera] |
| RefSeq | XP_002301872.1 | 0 | 22 | 350 | 1 | 328 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002510373.1 | 0 | 1 | 372 | 4 | 366 | Glucan endo-1,3-beta-glucosidase precursor, putative [Ricinus communis] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 3ur8_B | 0 | 23 | 347 | 1 | 315 | A Chain A, Structural Studies On The Mobility In The Active Site Of The Thermoascus Aurantiacus Xylanase I |
| PDB | 3ur8_A | 0 | 23 | 347 | 1 | 315 | A Chain A, Structural Studies On The Mobility In The Active Site Of The Thermoascus Aurantiacus Xylanase I |
| PDB | 3ur7_B | 0 | 23 | 347 | 1 | 315 | A Chain A, Higher-density Crystal Structure Of Potato Endo-1,3-beta-glucanase |
| PDB | 3ur7_A | 0 | 23 | 347 | 1 | 315 | A Chain A, Higher-density Crystal Structure Of Potato Endo-1,3-beta-glucanase |
| PDB | 4gzj_A | 0 | 23 | 347 | 1 | 315 | A Chain A, Higher-density Crystal Structure Of Potato Endo-1,3-beta-glucanase |
