| Basic Information | |
|---|---|
| Species | Arabidopsis lyrata |
| Cazyme ID | 494979 |
| Family | CE8 |
| Protein Properties | Length: 573 Molecular Weight: 63086.3 Isoelectric Point: 8.8847 |
| Chromosome | Chromosome/Scaffold: 8 Start: 12782328 End: 12784637 |
| Description | Plant invertase/pectin methylesterase inhibitor superfamily |
| View CDS | |
| External Links |
|---|
| NCBI Taxonomy |
| Plaza |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| CE8 | 260 | 555 | 0 |
| NVVVAQDGSGQYKTINEALNIVPKANQKPFVIYIKQGVYNEKVDVTKKMTHVTFIGDGPTKTKITGSLNFYIGKVKTYHTATVAINGDHFTAKNIGFENT AGPEGHQAVALRVSGDYAVFYNCQIDGYQDTLYVHSHRQFFRDCTISGTVDFIFGDAKVVLQNCNIVVRKPMKGQSCMITAQGRTDVRESSGLVLQNCHI TGEPAYLPVKSINKAYLGRPWKEFSRTIIMGTTIDNIIDPAGWLPWNGDFALNTLYYAEYENNGPGSDQAQRVKWPGIKKISPKQARRFTPARFLR | |||
| Full Sequence |
|---|
| Protein Sequence Length: 573 Download |
| MGVDSELKKK KCIIAGVITA LLVIMVVAVA IITSRNTSHN SDKIAPVQIK TTTNAVEAVC 60 APTDYKETCV NSLMKASPDS TQPLDLIKLG FNVTIRSIKD GIKKASAELK AKAANDNETK 120 GALELCEKLM NDATDDLKKC LDNFDGFSIT QIEDFVEDLR VWLSGSIAYQ QTCMDTFEEI 180 KSNLSQDMHK IFKTSRELTS NGLAMITNIS NLLGEFNITG LTGDLGNYAR KLLSTEDGIP 240 SWVGPNTRQL MATKGGVKAN VVVAQDGSGQ YKTINEALNI VPKANQKPFV IYIKQGVYNE 300 KVDVTKKMTH VTFIGDGPTK TKITGSLNFY IGKVKTYHTA TVAINGDHFT AKNIGFENTA 360 GPEGHQAVAL RVSGDYAVFY NCQIDGYQDT LYVHSHRQFF RDCTISGTVD FIFGDAKVVL 420 QNCNIVVRKP MKGQSCMITA QGRTDVRESS GLVLQNCHIT GEPAYLPVKS INKAYLGRPW 480 KEFSRTIIMG TTIDNIIDPA GWLPWNGDFA LNTLYYAEYE NNGPGSDQAQ RVKWPGIKKI 540 SPKQARRFTP ARFLRGNLWI PPNRVPYMGN LQ* 600 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| PLN02468 | PLN02468 | 2.0e-172 | 50 | 567 | 522 | + putative pectinesterase/pectinesterase inhibitor | ||
| PLN02990 | PLN02990 | 0 | 1 | 572 | 572 | + Probable pectinesterase/pectinesterase inhibitor | ||
| PLN02217 | PLN02217 | 0 | 39 | 571 | 534 | + probable pectinesterase/pectinesterase inhibitor | ||
| pfam01095 | Pectinesterase | 0 | 260 | 557 | 299 | + Pectinesterase. | ||
| PLN02745 | PLN02745 | 0 | 34 | 560 | 540 | + Putative pectinesterase/pectinesterase inhibitor | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0004857 | enzyme inhibitor activity |
| GO:0005618 | cell wall |
| GO:0030599 | pectinesterase activity |
| GO:0042545 | cell wall modification |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | AAF63815.1 | 0 | 38 | 571 | 33 | 562 | pectin methylesterase, putative [Arabidopsis thaliana] |
| DDBJ | BAC42959.2 | 0 | 38 | 567 | 33 | 564 | putative pectin methylesterase [Arabidopsis thaliana] |
| RefSeq | NP_187339.2 | 0 | 38 | 571 | 33 | 568 | pectinesterase family protein [Arabidopsis thaliana] |
| RefSeq | NP_199729.1 | 0 | 1 | 572 | 1 | 571 | pectinesterase family protein [Arabidopsis thaliana] |
| RefSeq | XP_002314364.1 | 0 | 48 | 571 | 52 | 568 | predicted protein [Populus trichocarpa] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 1gq8_A | 0 | 257 | 567 | 5 | 315 | A Chain A, Pectin Methylesterase From Carrot |
| PDB | 1xg2_A | 0 | 259 | 571 | 3 | 315 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
| PDB | 2ntq_B | 3e-32 | 260 | 561 | 5 | 339 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
| PDB | 2ntq_A | 3e-32 | 260 | 561 | 5 | 339 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
| PDB | 2ntp_B | 3e-32 | 260 | 561 | 5 | 339 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
