Basic Information | |
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Species | Arabidopsis lyrata |
Cazyme ID | 496568 |
Family | GH35 |
Protein Properties | Length: 717 Molecular Weight: 79461.8 Isoelectric Point: 9.1141 |
Chromosome | Chromosome/Scaffold: 8 Start: 21134536 End: 21140106 |
Description | Glycosyl hydrolase family 35 protein |
View CDS |
External Links |
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NCBI Taxonomy |
Plaza |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GH35 | 37 | 341 | 0 |
LIIDGQRKLLFSGSIHYPRSTPEMWPSLIKKTKEGGIDVIQTYVFWNLHEPKLGQYDFSGRNDLVKFIKEIRSQGLYVCLRIGPFIEAEWNYGGLPFWLR DVPGMVYRTDNEPFKFHMQKFTTKIVNLMKSEGLYASQGGPIILSQIENEYANVEAAFHEKGASYIKWAGQMAVGLKTGVPWIMCKSPDAPDPVINTCNG MRCGETFPGPNSPNKPKMWTEDWTSFFQVYGTEPYIRSAEDIAFHAVLFIAKNGSYINYYMYHGGTNFGRTSSSYFITGYYDQAPLDEYGLLRQPKYGHL KELHA |
Full Sequence |
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Protein Sequence Length: 717 Download |
MEAARVFGLC LILVGMFLVF PGGATAAKGV TYDGRSLIID GQRKLLFSGS IHYPRSTPEM 60 WPSLIKKTKE GGIDVIQTYV FWNLHEPKLG QYDFSGRNDL VKFIKEIRSQ GLYVCLRIGP 120 FIEAEWNYGG LPFWLRDVPG MVYRTDNEPF KFHMQKFTTK IVNLMKSEGL YASQGGPIIL 180 SQIENEYANV EAAFHEKGAS YIKWAGQMAV GLKTGVPWIM CKSPDAPDPV INTCNGMRCG 240 ETFPGPNSPN KPKMWTEDWT SFFQVYGTEP YIRSAEDIAF HAVLFIAKNG SYINYYMYHG 300 GTNFGRTSSS YFITGYYDQA PLDEYGLLRQ PKYGHLKELH AAIKSSANPL LQGKQTILSL 360 GPMQQAYVFE DASSGCVAFL VNNDAKVSQI QFRKSSYSLS PKSIGILQNC KNLIYETAKV 420 NVEKNKRVTT PVQVFNVPEK WEGFRETIPA FSGTSLKANA LLEHTNLTKD KTDYLWYTSS 480 FKPDSPCTNP SIYIESSGHV VHVFVNNALA GSGHGSRDIK VVKLQVPASL TNGQNSISIL 540 SGMVGLPDSG AYMERKSYGL TKVQISCGGT KPIDLSGSQW GYSVGLLGEK VRLQQWRNLN 600 RVKWSMNNAG LIKNRPLIWY KTIFDGPNGD GPVGLNMSSM GKGEIWVNGE SIGRYWVSFL 660 TPSGHPSQSI YHIPREFLKP SGNLLVVFEE EGGDPLGISL NTISVIGSNR AQSQLS* 720 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
pfam13364 | BetaGal_dom4_5 | 0.004 | 464 | 547 | 91 | + Beta-galactosidase jelly roll domain. This domain is found in beta galactosidase enzymes. It has a jelly roll fold. | ||
pfam02449 | Glyco_hydro_42 | 5.0e-6 | 52 | 195 | 158 | + Beta-galactosidase. This group of beta-galactosidase enzymes belong to the glycosyl hydrolase 42 family. The enzyme catalyzes the hydrolysis of terminal, non-reducing terminal beta-D-galactosidase residues. | ||
COG1874 | LacA | 4.0e-24 | 30 | 319 | 322 | + Beta-galactosidase [Carbohydrate transport and metabolism] | ||
pfam01301 | Glyco_hydro_35 | 7.0e-157 | 36 | 343 | 322 | + Glycosyl hydrolases family 35. | ||
PLN03059 | PLN03059 | 0 | 9 | 700 | 722 | + beta-galactosidase; Provisional |
Gene Ontology | |
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GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0005975 | carbohydrate metabolic process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
DDBJ | BAF01618.1 | 0 | 1 | 716 | 1 | 718 | beta-galactosidase like protein [Arabidopsis thaliana] |
EMBL | CAB64742.1 | 0 | 1 | 716 | 1 | 718 | putative beta-galactosidase [Arabidopsis thaliana] |
RefSeq | NP_568978.2 | 0 | 1 | 716 | 1 | 718 | MUM2 (MUCILAGE-MODIFIED 2); beta-galactosidase [Arabidopsis thaliana] |
RefSeq | XP_002274012.1 | 0 | 30 | 704 | 62 | 735 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002307056.1 | 0 | 30 | 714 | 25 | 710 | predicted protein [Populus trichocarpa] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 3d3a_A | 2e-39 | 36 | 339 | 14 | 325 | A Chain A, Crystal Structure Of A Beta-Galactosidase From Bacteroides Thetaiotaomicron |
PDB | 3d3a_A | 0.002 | 613 | 692 | 505 | 575 | A Chain A, Crystal Structure Of A Beta-Galactosidase From Bacteroides Thetaiotaomicron |
PDB | 3thd_D | 1e-29 | 30 | 339 | 11 | 330 | A Chain A, Crystal Structure Of A Beta-Galactosidase From Bacteroides Thetaiotaomicron |
PDB | 3thd_C | 1e-29 | 30 | 339 | 11 | 330 | A Chain A, Crystal Structure Of A Beta-Galactosidase From Bacteroides Thetaiotaomicron |