| Basic Information | |
|---|---|
| Species | Arabidopsis lyrata |
| Cazyme ID | 496670 |
| Family | GH3 |
| Protein Properties | Length: 785 Molecular Weight: 84333.2 Isoelectric Point: 7.5739 |
| Chromosome | Chromosome/Scaffold: 8 Start: 21563304 End: 21566573 |
| Description | beta-D-xylosidase 4 |
| View CDS | |
| External Links |
|---|
| NCBI Taxonomy |
| Plaza |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| GH3 | 92 | 341 | 0 |
| GVTRLGIPTYEWWSEALHGVSYIGPGTHFSSQVPGATSFPQVILTAASFNVSLFQAIGKVVSTEARAMYNVGLAGLTYWSPNVNIFRDPRWGRGQETPGE DPLLASKYASGYVKGLQETDGGDSNRLKVAACCKHYTAYDVDNWKGVERYSFNAVVTQQDMDDTYQPPFKSCVVDGNVASVMCSYNQVNGKPTCADPDLL SGVIRGEWKLNGYIVSDCDSVDVLYKNQHYTKTPAEAAAISILAGLDLNC | |||
| Full Sequence |
|---|
| Protein Sequence Length: 785 Download |
| MGSSSPLTRR NRAPPSSVSS VFLTFLCFFL YFLDLSNAQS SPVFACDVAA NPSLAAYGFC 60 NTVLKIEYRV ADLVARLTLQ EKIGFLVSKA NGVTRLGIPT YEWWSEALHG VSYIGPGTHF 120 SSQVPGATSF PQVILTAASF NVSLFQAIGK VVSTEARAMY NVGLAGLTYW SPNVNIFRDP 180 RWGRGQETPG EDPLLASKYA SGYVKGLQET DGGDSNRLKV AACCKHYTAY DVDNWKGVER 240 YSFNAVVTQQ DMDDTYQPPF KSCVVDGNVA SVMCSYNQVN GKPTCADPDL LSGVIRGEWK 300 LNGYIVSDCD SVDVLYKNQH YTKTPAEAAA ISILAGLDLN CGSFLGQHTE EAVKSGLVNE 360 AAIDKAISNN FLTLMRLGFF DGNPKNQIYG GLGPTDVCTS ANQELAADAA RQGIVLLKNT 420 GFLPLSPKSI KTLAVIGPNA NVTKTMIGNY EGTPCKYTTP LQGLAGAVST TYLPGCSNVA 480 CAVADVAGAT KLAATADVTV LLIGADQSIE AESRDRVDLN LPGQQQELVI QVAKAAKGPV 540 LLVIMSGGGF DITFAKNDPK IAGILWVGYP GEAGGIAIAD IIFGRYNPSG RLPMTWYPQS 600 YVEKVPMTIM NMRPDKSKGY PGRTYRFYTG ETVYAFGDGL SYTKFSHSLV KAPSLVSLSL 660 EENHVCRSSE CQSLDAIGPH CENAVSGGGS AFEVQIKVRN GGDREGIHTV FLFTTPPAIH 720 GSPRKHLLGF EKIRLGKMEE AVVRFKVEVC KDLSVVDEIG KRKIGLGKHL LHVGDLKHSL 780 SIRI* 840 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| pfam01915 | Glyco_hydro_3_C | 4.0e-49 | 414 | 643 | 238 | + Glycosyl hydrolase family 3 C-terminal domain. This domain is involved in catalysis and may be involved in binding beta-glucan. This domain is found associated with pfam00933. | ||
| COG1472 | BglX | 5.0e-55 | 94 | 477 | 394 | + Beta-glucosidase-related glycosidases [Carbohydrate transport and metabolism] | ||
| pfam00933 | Glyco_hydro_3 | 3.0e-66 | 78 | 369 | 322 | + Glycosyl hydrolase family 3 N terminal domain. | ||
| PRK15098 | PRK15098 | 1.0e-70 | 45 | 749 | 795 | + beta-D-glucoside glucohydrolase; Provisional | ||
| PLN03080 | PLN03080 | 0 | 36 | 784 | 763 | + Probable beta-xylosidase; Provisional | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
| GO:0005975 | carbohydrate metabolic process |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 3u48_B | 0 | 128 | 747 | 91 | 696 | A Chain A, Horse Radish Peroxidase, Mutant S167y |
| PDB | 3u48_A | 0 | 128 | 747 | 91 | 696 | A Chain A, Horse Radish Peroxidase, Mutant S167y |
| PDB | 3u4a_B | 0 | 128 | 747 | 91 | 696 | A Chain A, Horse Radish Peroxidase, Mutant S167y |
| PDB | 3u4a_A | 0 | 128 | 747 | 91 | 696 | A Chain A, Horse Radish Peroxidase, Mutant S167y |
| PDB | 2x41_A | 2e-40 | 69 | 747 | 3 | 676 | A Chain A, Horse Radish Peroxidase, Mutant S167y |
