| Basic Information | |
|---|---|
| Species | Arabidopsis lyrata |
| Cazyme ID | 496695 |
| Family | CBM43 |
| Protein Properties | Length: 486 Molecular Weight: 53982.9 Isoelectric Point: 5.8641 |
| Chromosome | Chromosome/Scaffold: 8 Start: 21675033 End: 21677132 |
| Description | O-Glycosyl hydrolases family 17 protein |
| View CDS | |
| External Links |
|---|
| NCBI Taxonomy |
| Plaza |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| CBM43 | 369 | 449 | 1.5e-24 |
| WCVVNNDTVNLDEVGPDLDYACYHGDCTAMEAGSTCSKLTKVQNISYAFNMYFQIQDQDVRACDFKGAAMITKVNASVGSC | |||
| GH17 | 29 | 347 | 0 |
| GVNWGNIASHPLNPNIVVQMLKDNKINKVKLFDADSWTMNALAGTGMEVMVGIPNNLLETLADDYDNAKDWVKENVTQYMRKGGVDIKYVAVGNEPFLSA YNGSFLKTTFPALKNIHRALKEAGHTDKMKATIPQNAEVYQSANDKPSEGDFRKDVKQTMLDIVNFFHDNDLPFTVNIYPFLSLYLNEHFPVEFAFLDGN GQTMTDKGKNYDNVFDANYDTLVYALKKAGIHDMKIIVGEVGWPTDGHKYATPKLAEKFYAGLMKRLAKDGGTPTRPERLEVYLFGFLDEDMKSILPGPF ERHWGIFRYDGTPKFMLDF | |||
| Full Sequence |
|---|
| Protein Sequence Length: 486 Download |
| MAGRAAMLVN VGTVIMTVLT LASLVGGFGV NWGNIASHPL NPNIVVQMLK DNKINKVKLF 60 DADSWTMNAL AGTGMEVMVG IPNNLLETLA DDYDNAKDWV KENVTQYMRK GGVDIKYVAV 120 GNEPFLSAYN GSFLKTTFPA LKNIHRALKE AGHTDKMKAT IPQNAEVYQS ANDKPSEGDF 180 RKDVKQTMLD IVNFFHDNDL PFTVNIYPFL SLYLNEHFPV EFAFLDGNGQ TMTDKGKNYD 240 NVFDANYDTL VYALKKAGIH DMKIIVGEVG WPTDGHKYAT PKLAEKFYAG LMKRLAKDGG 300 TPTRPERLEV YLFGFLDEDM KSILPGPFER HWGIFRYDGT PKFMLDFTGQ GRQMVPVAAK 360 GVQYLEKQWC VVNNDTVNLD EVGPDLDYAC YHGDCTAMEA GSTCSKLTKV QNISYAFNMY 420 FQIQDQDVRA CDFKGAAMIT KVNASVGSCL FPVQIVSGSD DFRINFVFGR FVVFGLVLLG 480 LLTVI* 540 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| COG5309 | COG5309 | 0.0002 | 264 | 338 | 79 | + Exo-beta-1,3-glucanase [Carbohydrate transport and metabolism] | ||
| pfam07983 | X8 | 3.0e-19 | 368 | 438 | 78 | + X8 domain. The X8 domain domain contains at least 6 conserved cysteine residues that presumably form three disulphide bridges. The domain is found in an Olive pollen allergen as well as at the C-terminus of several families of glycosyl hydrolases. This domain may be involved in carbohydrate binding. This domain is characteristic of GPI-anchored domains. | ||
| smart00768 | X8 | 2.0e-32 | 368 | 451 | 86 | + Possibly involved in carbohydrate binding. The X8 domain, which may be involved in carbohydrate binding, is found in an Olive pollen antigen as well as at the C terminus of family 17 glycosyl hydrolases. It contains 6 conserved cysteine residues which presumably form three disulfide bridges. | ||
| pfam00332 | Glyco_hydro_17 | 2.0e-67 | 29 | 347 | 321 | + Glycosyl hydrolases family 17. | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
| GO:0005975 | carbohydrate metabolic process |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| EMBL | CAN62816.1 | 0 | 28 | 460 | 27 | 459 | hypothetical protein [Vitis vinifera] |
| RefSeq | NP_201284.1 | 0 | 1 | 465 | 1 | 465 | glycosyl hydrolase family 17 protein [Arabidopsis thaliana] |
| RefSeq | XP_002275701.1 | 0 | 28 | 460 | 27 | 459 | PREDICTED: hypothetical protein [Vitis vinifera] |
| RefSeq | XP_002310612.1 | 0 | 4 | 478 | 3 | 479 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002530257.1 | 0 | 14 | 460 | 15 | 460 | Glucan endo-1,3-beta-glucosidase precursor, putative [Ricinus communis] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 3ur8_B | 0 | 29 | 348 | 4 | 315 | A Chain A, Crystal Structure Of A Family Gt4 Glycosyltransferase From Bacillus Anthracis Orf Ba1558. |
| PDB | 3ur8_A | 0 | 29 | 348 | 4 | 315 | A Chain A, Crystal Structure Of A Family Gt4 Glycosyltransferase From Bacillus Anthracis Orf Ba1558. |
| PDB | 3ur7_B | 0 | 29 | 348 | 4 | 315 | A Chain A, Higher-density Crystal Structure Of Potato Endo-1,3-beta-glucanase |
| PDB | 3ur7_A | 0 | 29 | 348 | 4 | 315 | A Chain A, Higher-density Crystal Structure Of Potato Endo-1,3-beta-glucanase |
| PDB | 4gzj_A | 0 | 29 | 347 | 4 | 314 | A Chain A, Higher-density Crystal Structure Of Potato Endo-1,3-beta-glucanase |
