| Basic Information | |
|---|---|
| Species | Arabidopsis lyrata |
| Cazyme ID | 496876 |
| Family | GT43 |
| Protein Properties | Length: 463 Molecular Weight: 52074.5 Isoelectric Point: 10.5435 |
| Chromosome | Chromosome/Scaffold: 8 Start: 22411411 End: 22413264 |
| Description | Nucleotide-diphospho-sugar transferases superfamily protein |
| View CDS | |
| External Links |
|---|
| NCBI Taxonomy |
| Plaza |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| GT43 | 174 | 388 | 0 |
| MHSLMLVPYDLVWIVVEAGGITNETASFIAKSGLKTIHLGFDQKMPNTWEDRHKLKTKMRLHALRIVREKKLDGIVMFADDSNMHNELSSVLKKEEGKRK EKPSMPIQGPSCNSSEKLVGWHIFNTQPYAKKTAVYIDEKAAVMPIKMEWSGFVLNSRLLWKESVDEKPAWIKDLSLLDDNDEIDSPLSLVKDPSMLEPL GSCGRRVLLWWLRVE | |||
| Full Sequence |
|---|
| Protein Sequence Length: 463 Download |
| MKLSVFRLSY WNRRGNSFRS SPSLDPTFDG KSPSSVFWFV IHGLCCLISL ILGFRFSHLV 60 LFFLFSTSVT NLYTTPFLSA GNGGVSQLLR LKPLETATNS TVKKNSRVVV GRHGIRIRPW 120 PHPNPIEVLR AHQLLVRVQK EQKSMYGVRS PKTVIVVTPT YVRTFQALHL TGVMHSLMLV 180 PYDLVWIVVE AGGITNETAS FIAKSGLKTI HLGFDQKMPN TWEDRHKLKT KMRLHALRIV 240 REKKLDGIVM FADDSNMHNE LSSVLKKEEG KRKEKPSMPI QGPSCNSSEK LVGWHIFNTQ 300 PYAKKTAVYI DEKAAVMPIK MEWSGFVLNS RLLWKESVDE KPAWIKDLSL LDDNDEIDSP 360 LSLVKDPSML EPLGSCGRRV LLWWLRVEAR ADSKFPPGWI IKSPLEITVP SKRTPWPDSS 420 SELPAAIKEA KSDTKPRGSN SKSSKGKQEP KAFNGVKVST TS* 480 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| PLN02458 | PLN02458 | 3.0e-11 | 152 | 349 | 208 | + transferase, transferring glycosyl groups | ||
| pfam03360 | Glyco_transf_43 | 8.0e-40 | 173 | 389 | 235 | + Glycosyltransferase family 43. | ||
| cd00218 | GlcAT-I | 5.0e-61 | 152 | 389 | 255 | + Beta1,3-glucuronyltransferase I (GlcAT-I) is involved in the initial steps of proteoglycan synthesis. Beta1,3-glucuronyltransferase I (GlcAT-I) domain; GlcAT-I is a Key enzyme involved in the initial steps of proteoglycan synthesis. GlcAT-I catalyzes the transfer of a glucuronic acid moiety from the uridine diphosphate-glucuronic acid (UDP-GlcUA) to the common linkage region of trisaccharide Gal-beta-(1-3)-Gal-beta-(1-4)-Xyl of proteoglycans. The enzyme has two subdomains that bind the donor and acceptor substrate separately. The active site is located at the cleft between both subdomains in which the trisaccharide molecule is oriented perpendicular to the UDP. This family has been classified as Glycosyltransferase family 43 (GT-43). | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0015018 | galactosylgalactosylxylosylprotein 3-beta-glucuronosyltransferase activity |
| GO:0016020 | membrane |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| EMBL | CAI93186.1 | 0 | 1 | 448 | 1 | 477 | glycosyltransferase [Gossypium raimondii] |
| EMBL | CBI21374.1 | 0 | 1 | 429 | 1 | 430 | unnamed protein product [Vitis vinifera] |
| RefSeq | NP_195407.2 | 0 | 1 | 414 | 1 | 453 | IRX14 (irregular xylem 14); transferase, transferring glycosyl groups / xylosyltransferase [Arabidopsis thaliana] |
| RefSeq | NP_201524.1 | 0 | 1 | 462 | 1 | 492 | glycosyl transferase family 43 protein [Arabidopsis thaliana] |
| RefSeq | XP_002283249.1 | 0 | 1 | 429 | 1 | 468 | PREDICTED: hypothetical protein [Vitis vinifera] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 1v84_B | 0.000000007 | 153 | 388 | 4 | 234 | A Chain A, Solution Structure Of The C-Terminal Domain Ole E 9 |
| PDB | 1v84_A | 0.000000007 | 153 | 388 | 4 | 234 | A Chain A, Solution Structure Of The C-Terminal Domain Ole E 9 |
| PDB | 1v83_B | 0.000000007 | 153 | 388 | 4 | 234 | A Chain A, Solution Structure Of The C-Terminal Domain Ole E 9 |
| PDB | 1v83_A | 0.000000007 | 153 | 388 | 4 | 234 | A Chain A, Solution Structure Of The C-Terminal Domain Ole E 9 |
| PDB | 1v82_B | 0.000000007 | 153 | 388 | 4 | 234 | A Chain A, Crystal Structure Of Human Glcat-P Apo Form |
