Basic Information | |
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Species | Selaginella moellendorffii |
Cazyme ID | 5415 |
Family | GT47 |
Protein Properties | Length: 332 Molecular Weight: 38397.3 Isoelectric Point: 10.0272 |
View CDS |
External Links |
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NCBI Taxonomy |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GT47 | 5 | 286 | 0 |
NIKVYIYDLPSSYNTDWLVDSRCSSHLFAAEVAIHQNLLRSPVRTLDPDEADFFFMPVYVSCNFTSRSGFPTLFHASDILQAAVGLVSRNMPFWDRHQGR DHVFVATHDFGACFHAMDLAVTMGIPQFLRNSIILQTFGEKNKHPCQNVDHIQIPPYVRRKILAFFRGKMEIHPKNVSGHMYSRGVRTTIWRRFSHDRRF FIKRKRSDNYKAEMLRSVFCLCPLGWAPWSPRIVESVIQGCIPVIIADNIQLPYSHVIDWRKISVTVAERDVHKLDRILSRV |
Full Sequence |
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Protein Sequence Length: 332 Download |
GLSSNIKVYI YDLPSSYNTD WLVDSRCSSH LFAAEVAIHQ NLLRSPVRTL DPDEADFFFM 60 PVYVSCNFTS RSGFPTLFHA SDILQAAVGL VSRNMPFWDR HQGRDHVFVA THDFGACFHA 120 MDLAVTMGIP QFLRNSIILQ TFGEKNKHPC QNVDHIQIPP YVRRKILAFF RGKMEIHPKN 180 VSGHMYSRGV RTTIWRRFSH DRRFFIKRKR SDNYKAEMLR SVFCLCPLGW APWSPRIVES 240 VIQGCIPVII ADNIQLPYSH VIDWRKISVT VAERDVHKLD RILSRVAATN VSMIQANLWR 300 DEVRQALVYN QPLVRGDATW QVLDLLSKRK NK |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
pfam03016 | Exostosin | 2.0e-70 | 2 | 286 | 305 | + Exostosin family. The EXT family is a family of tumour suppressor genes. Mutations of EXT1 on 8q24.1, EXT2 on 11p11-13, and EXT3 on 19p have been associated with the autosomal dominant disorder known as hereditary multiple exostoses (HME). This is the most common known skeletal dysplasia. The chromosomal locations of other EXT genes suggest association with other forms of neoplasia. EXT1 and EXT2 have both been shown to encode a heparan sulphate polymerase with both D-glucuronyl (GlcA) and N-acetyl-D-glucosaminoglycan (GlcNAC) transferase activities. The nature of the defect in heparan sulphate biosynthesis in HME is unclear. |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | AAX33322.1 | 0 | 1 | 332 | 83 | 432 | secondary cell wall-related glycosyltransferase family 47 [Populus tremula x Populus tremuloides] |
RefSeq | NP_197685.2 | 0 | 1 | 329 | 104 | 450 | F8H (FRA8 HOMOLOG); catalytic [Arabidopsis thaliana] |
RefSeq | XP_001754437.1 | 0 | 2 | 329 | 1 | 345 | predicted protein [Physcomitrella patens subsp. patens] |
RefSeq | XP_001777222.1 | 0 | 1 | 332 | 15 | 363 | predicted protein [Physcomitrella patens subsp. patens] |
RefSeq | XP_001781950.1 | 0 | 2 | 332 | 1 | 348 | predicted protein [Physcomitrella patens subsp. patens] |
Metabolic Pathways | |||
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Pathway Name | Reaction | EC | Protein Name |
xylogalacturonan biosynthesis | RXN-9589 | EC-2.4.2.41 | xylogalacturonan β-1,3-xylosyltransferase |
EST Download unfiltered results here | ||||
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Hit | Length | Start | End | EValue |
HO797103 | 346 | 1 | 329 | 0 |
FE473157 | 222 | 1 | 209 | 0 |
FE473156 | 213 | 132 | 332 | 0 |
CK261693 | 316 | 30 | 328 | 0 |
DY287013 | 313 | 38 | 332 | 0 |
Sequence Alignments (This image is cropped. Click for full image.) |
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