| Basic Information | |
|---|---|
| Species | Ricinus communis |
| Cazyme ID | 56517.m000022 |
| Family | GT19 |
| Protein Properties | Length: 128 Molecular Weight: 13858.3 Isoelectric Point: 10.8145 |
| Chromosome | Chromosome/Scaffold: 56517 Start: 7 End: 390 |
| Description | transferases, transferring glycosyl groups |
| View CDS | |
| External Links |
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| NCBI Taxonomy |
| Plaza |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
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| Family | Start | End | Evalue |
| GT19 | 2 | 128 | 2.66247e-44 |
| LIAAEASGDNLGAGLAKTLRTRLGDKVRFVGVGGARMAAEGVESPFDISELSILGLFEGLKAYPRVLRRLKDVEALAAREKPDVAVLIDAWGFNIRLAKR LRTLDPSMALIKYVAPQVWASRPGRAK | |||
| Full Sequence |
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| Protein Sequence Length: 128 Download |
| MLIAAEASGD NLGAGLAKTL RTRLGDKVRF VGVGGARMAA EGVESPFDIS ELSILGLFEG 60 LKAYPRVLRR LKDVEALAAR EKPDVAVLID AWGFNIRLAK RLRTLDPSMA LIKYVAPQVW 120 ASRPGRAK |
| Functional Domains Download unfiltered results here | ||||||||
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| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| PRK14089 | PRK14089 | 1.0e-19 | 18 | 128 | 111 | + ipid-A-disaccharide synthase; Provisional | ||
| TIGR00215 | lpxB | 5.0e-26 | 2 | 128 | 127 | + lipid-A-disaccharide synthase. Lipid-A precursor biosynthesis producing lipid A disaccharide in a condensation reaction. transcribed as part of an operon including lpxA [Cell envelope, Biosynthesis and degradation of surface polysaccharides and lipopolysaccharides]. | ||
| pfam02684 | LpxB | 5.0e-37 | 2 | 128 | 127 | + Lipid-A-disaccharide synthetase. This is a family of lipid-A-disaccharide synthetases, EC:2.4.2.128. These enzymes catalyze the reaction: UDP-2,3-bis(3-hydroxytetradecanoyl) glucosamine + 2,3-bis(3-hydroxytetradecanoyl)-beta-D-glucosaminyl 1-phosphate <=> UDP + 2,3-bis(3-hydroxytetradecanoyl)-D-glucosaminyl-1,6 -beta-D-2,3-bis(3-hydroxytetradecanoyl)-beta-D-glucosaminyl 1-phosphate. These enzymes catalyze the fist disaccharide step in the synthesis of lipid-A-disaccharide. | ||
| PRK00025 | lpxB | 2.0e-41 | 1 | 128 | 128 | + lipid-A-disaccharide synthase; Reviewed | ||
| COG0763 | LpxB | 3.0e-50 | 1 | 128 | 128 | + Lipid A disaccharide synthetase [Cell envelope biogenesis, outer membrane] | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0008915 | lipid-A-disaccharide synthase activity |
| GO:0009245 | lipid A biosynthetic process |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| RefSeq | NP_420716.1 | 0 | 1 | 128 | 12 | 139 | lipid-A-disaccharide synthase [Caulobacter crescentus CB15] |
| RefSeq | XP_002540463.1 | 0 | 1 | 128 | 1 | 128 | transferase, transferring glycosyl groups, putative [Ricinus communis] |
| RefSeq | YP_001684416.1 | 0 | 1 | 128 | 15 | 143 | lipid-A-disaccharide synthase [Caulobacter sp. K31] |
| RefSeq | YP_002130606.1 | 0 | 1 | 128 | 10 | 137 | lipid-A-disaccharide synthase [Phenylobacterium zucineum HLK1] |
| RefSeq | ZP_05031743.1 | 0 | 1 | 128 | 8 | 135 | lipid-A-disaccharide synthase [Brevundimonas sp. BAL3] |
| Hydropathy |
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| EST Download unfiltered results here | ||||
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| Hit | Length | Start | End | EValue |
| GE205168 | 131 | 1 | 121 | 1e-18 |
| GE205167 | 131 | 1 | 121 | 1e-18 |
| GE185228 | 131 | 1 | 121 | 2e-18 |
| GW893403 | 135 | 1 | 128 | 2e-18 |
| FY429474 | 134 | 1 | 128 | 3e-18 |
| Sequence Alignments (This image is cropped. Click for full image.) |
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| Phylogeny |
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