Basic Information | |
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Species | Ricinus communis |
Cazyme ID | 58888.m000026 |
Family | GH10 |
Protein Properties | Length: 179 Molecular Weight: 19886 Isoelectric Point: 9.4196 |
Chromosome | Chromosome/Scaffold: 58888 Start: 16 End: 552 |
Description | Glycosyl hydrolase family 10 protein |
View CDS |
External Links |
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NCBI Taxonomy |
Plaza |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GH10 | 32 | 178 | 7.69999e-41 |
LGKRKGLNVGNAIGGRWFRDPAYKALMARECNMLVAENEGKWQALEPRQGAYQFGPADEMYAWAKSQGMLVRGHNLIWQDAKWLPKWVNEYDFGAQPAKA AEALLRKHIVTVCEHFGDAIHSYDVVNEAIDPKTGGLRSNVFTERLG |
Full Sequence |
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Protein Sequence Length: 179 Download |
MKISRRAVLA MMAAGGVLPL HAAELQEPLK VLGKRKGLNV GNAIGGRWFR DPAYKALMAR 60 ECNMLVAENE GKWQALEPRQ GAYQFGPADE MYAWAKSQGM LVRGHNLIWQ DAKWLPKWVN 120 EYDFGAQPAK AAEALLRKHI VTVCEHFGDA IHSYDVVNEA IDPKTGGLRS NVFTERLGA 180 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
smart00633 | Glyco_10 | 4.0e-30 | 72 | 178 | 108 | + Glycosyl hydrolase family 10. | ||
COG3693 | XynA | 2.0e-31 | 12 | 178 | 169 | + Beta-1,4-xylanase [Carbohydrate transport and metabolism] | ||
pfam00331 | Glyco_hydro_10 | 2.0e-42 | 29 | 178 | 151 | + Glycosyl hydrolase family 10. |
Gene Ontology | |
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GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0005975 | carbohydrate metabolic process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | ACN58881.1 | 0 | 1 | 179 | 7 | 188 | endo-1,4-beta-xylanase A precursor [uncultured bacterium BLR13] |
RefSeq | XP_002538457.1 | 0 | 1 | 179 | 1 | 179 | conserved hypothetical protein [Ricinus communis] |
RefSeq | YP_002131319.1 | 3e-37 | 27 | 178 | 28 | 183 | glycosyl hydrolase, family 10 [Phenylobacterium zucineum HLK1] |
RefSeq | ZP_04768706.1 | 4e-34 | 16 | 178 | 24 | 184 | glycoside hydrolase family 10 [Asticcacaulis excentricus CB 48] |
RefSeq | ZP_06121053.1 | 3e-32 | 26 | 178 | 33 | 192 | Endo-1,4-beta-xylanase [Caulobacter segnis ATCC 21756] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1xyz_B | 2e-25 | 29 | 178 | 28 | 174 | A Chain A, A Common Protein Fold And Similar Active Site In Two Distinct Families Of Beta-Glycanases |
PDB | 1xyz_A | 2e-25 | 29 | 178 | 28 | 174 | A Chain A, A Common Protein Fold And Similar Active Site In Two Distinct Families Of Beta-Glycanases |
PDB | 3cuj_A | 5e-20 | 29 | 178 | 4 | 146 | A Chain A, A Common Protein Fold And Similar Active Site In Two Distinct Families Of Beta-Glycanases |
PDB | 3cui_A | 5e-20 | 29 | 178 | 4 | 146 | A Chain A, A Common Protein Fold And Similar Active Site In Two Distinct Families Of Beta-Glycanases |
PDB | 3cuh_A | 5e-20 | 29 | 178 | 4 | 146 | A Chain A, A Common Protein Fold And Similar Active Site In Two Distinct Families Of Beta-Glycanases |