Basic Information | |
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Species | Selaginella moellendorffii |
Cazyme ID | 64314 |
Family | GT47 |
Protein Properties | Length: 386 Molecular Weight: 44682 Isoelectric Point: 6.8334 |
View CDS |
External Links |
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NCBI Taxonomy |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GT47 | 1 | 328 | 0 |
CSGRAIYIYKLPERFNRAILEQCGTFLPWFSMCDYFTNSGMGVPVQSSSSSVLAPAGKWFQTNQYALDVLFHQRLLHYPCLTDSPEEASLFYVPYYAGLD VLRYHYTNETLEQKNELGLEVMDLLKRQQWWWRRNGRDHLLVMGKITWDFRRNNETMWGNTLLKMAEFENMTKLLLERDPFEPNEIAVPHPTYFHPSSDS DISTWISRIASSSRDNLVSFAGMPRDPEHLRTHLINQCKDRPDRCKLLACSGNLCDSPEPTMELFLSSQFCMQPPGDSATRRSVFDSLIAGCIPVLFDAD TAYFQYAWHLPEDSSSYSVFVSASDVKR |
Full Sequence |
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Protein Sequence Length: 386 Download |
CSGRAIYIYK LPERFNRAIL EQCGTFLPWF SMCDYFTNSG MGVPVQSSSS SVLAPAGKWF 60 QTNQYALDVL FHQRLLHYPC LTDSPEEASL FYVPYYAGLD VLRYHYTNET LEQKNELGLE 120 VMDLLKRQQW WWRRNGRDHL LVMGKITWDF RRNNETMWGN TLLKMAEFEN MTKLLLERDP 180 FEPNEIAVPH PTYFHPSSDS DISTWISRIA SSSRDNLVSF AGMPRDPEHL RTHLINQCKD 240 RPDRCKLLAC SGNLCDSPEP TMELFLSSQF CMQPPGDSAT RRSVFDSLIA GCIPVLFDAD 300 TAYFQYAWHL PEDSSSYSVF VSASDVKRRR VDVVDVVEHV SPRQRLLMRR KIIEEIVPGL 360 LYAQPGTRLL KYRDAFDTTI ARLLQK |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
pfam03016 | Exostosin | 3.0e-52 | 1 | 311 | 322 | + Exostosin family. The EXT family is a family of tumour suppressor genes. Mutations of EXT1 on 8q24.1, EXT2 on 11p11-13, and EXT3 on 19p have been associated with the autosomal dominant disorder known as hereditary multiple exostoses (HME). This is the most common known skeletal dysplasia. The chromosomal locations of other EXT genes suggest association with other forms of neoplasia. EXT1 and EXT2 have both been shown to encode a heparan sulphate polymerase with both D-glucuronyl (GlcA) and N-acetyl-D-glucosaminoglycan (GlcNAC) transferase activities. The nature of the defect in heparan sulphate biosynthesis in HME is unclear. |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
RefSeq | XP_001757088.1 | 0 | 1 | 386 | 26 | 418 | predicted protein [Physcomitrella patens subsp. patens] |
RefSeq | XP_001759310.1 | 0 | 1 | 384 | 2 | 392 | predicted protein [Physcomitrella patens subsp. patens] |
RefSeq | XP_001778302.1 | 0 | 1 | 384 | 29 | 410 | predicted protein [Physcomitrella patens subsp. patens] |
RefSeq | XP_002299537.1 | 0 | 1 | 386 | 187 | 568 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002509789.1 | 0 | 1 | 386 | 182 | 562 | Xyloglucan galactosyltransferase KATAMARI1, putative [Ricinus communis] |
EST Download unfiltered results here | ||||
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Hit | Length | Start | End | EValue |
FC340904 | 244 | 1 | 239 | 0 |
FC346433 | 228 | 91 | 313 | 0 |
FC451292 | 229 | 90 | 313 | 0 |
DY265125 | 318 | 7 | 313 | 0 |
FC899396 | 316 | 7 | 311 | 0 |
Sequence Alignments (This image is cropped. Click for full image.) |
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