Basic Information | |
---|---|
Species | Selaginella moellendorffii |
Cazyme ID | 75479 |
Family | CBM43 |
Protein Properties | Length: 450 Molecular Weight: 48397.4 Isoelectric Point: 4.8646 |
View CDS |
External Links |
---|
NCBI Taxonomy |
CAZyDB |
Signature Domain Download full data set without filtering | |||
---|---|---|---|
Family | Start | End | Evalue |
CBM43 | 348 | 428 | 1.3e-31 |
WCVAKQGVSDNSLQAALDYACGQGSADCSSIQPGQACFFPDSVFSHASFAFNSYYLKNKMAAGTCDFAGVATVTTNDPSMS | |||
GH17 | 10 | 330 | 0 |
IGVNYGSQGDNLPRPQQAVDFMRNNGITQVRIFDADPDILTALAGTGIQVIIGLTNAEILSVGHSSAEAASWVNKNVMQFLPNTNITGIAVGSEVLTDGT ASLYASILVATMKYIHAALVAANIDSQIKVSTPHSTVLIQDPFPPSRAFFDQTYAKTVVLPLLDFLSQTGSYFMLNIYPLAIYQQNRQVMSIDYALLRPN AGIQDTITKLTYTNVFDQMLDAAFSAMGALNHTDVGIVVSETGWPSRGDVTEVGVGVDNAETYNNNLVRHILNNTGTPRRPGIAVNAYIYEIFNEDRRQG ATSEKNYGIYYPDQTPVYSLD |
Full Sequence |
---|
Protein Sequence Length: 450 Download |
MECHATGAFI GVNYGSQGDN LPRPQQAVDF MRNNGITQVR IFDADPDILT ALAGTGIQVI 60 IGLTNAEILS VGHSSAEAAS WVNKNVMQFL PNTNITGIAV GSEVLTDGTA SLYASILVAT 120 MKYIHAALVA ANIDSQIKVS TPHSTVLIQD PFPPSRAFFD QTYAKTVVLP LLDFLSQTGS 180 YFMLNIYPLA IYQQNRQVMS IDYALLRPNA GIQDTITKLT YTNVFDQMLD AAFSAMGALN 240 HTDVGIVVSE TGWPSRGDVT EVGVGVDNAE TYNNNLVRHI LNNTGTPRRP GIAVNAYIYE 300 IFNEDRRQGA TSEKNYGIYY PDQTPVYSLD VTGRDSGGAG SNTSVRTWCV AKQGVSDNSL 360 QAALDYACGQ GSADCSSIQP GQACFFPDSV FSHASFAFNS YYLKNKMAAG TCDFAGVATV 420 TTNDPSMSKS SFAFFFALTS LVLVCRSFR* |
Functional Domains Download unfiltered results here | ||||||||
---|---|---|---|---|---|---|---|---|
Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
COG5309 | COG5309 | 0.0002 | 47 | 322 | 283 | + Exo-beta-1,3-glucanase [Carbohydrate transport and metabolism] | ||
pfam07983 | X8 | 5.0e-23 | 347 | 419 | 78 | + X8 domain. The X8 domain domain contains at least 6 conserved cysteine residues that presumably form three disulphide bridges. The domain is found in an Olive pollen allergen as well as at the C-terminus of several families of glycosyl hydrolases. This domain may be involved in carbohydrate binding. This domain is characteristic of GPI-anchored domains. | ||
smart00768 | X8 | 6.0e-36 | 347 | 425 | 79 | + Possibly involved in carbohydrate binding. The X8 domain, which may be involved in carbohydrate binding, is found in an Olive pollen antigen as well as at the C terminus of family 17 glycosyl hydrolases. It contains 6 conserved cysteine residues which presumably form three disulfide bridges. | ||
pfam00332 | Glyco_hydro_17 | 8.0e-92 | 10 | 330 | 321 | + Glycosyl hydrolases family 17. |
Annotations - NR Download unfiltered results here | |||||||
---|---|---|---|---|---|---|---|
Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
EMBL | CBI26850.1 | 0 | 8 | 432 | 21 | 444 | unnamed protein product [Vitis vinifera] |
RefSeq | NP_565269.1 | 0 | 8 | 432 | 21 | 444 | glycosyl hydrolase family 17 protein / beta-1,3-glucanase, putative [Arabidopsis thaliana] |
RefSeq | XP_001767901.1 | 0 | 8 | 426 | 26 | 446 | predicted protein [Physcomitrella patens subsp. patens] |
RefSeq | XP_002314794.1 | 0 | 8 | 432 | 16 | 439 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002527772.1 | 0 | 8 | 432 | 21 | 444 | Glucan endo-1,3-beta-glucosidase precursor, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
---|---|---|---|---|---|---|---|
Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 2cyg_A | 0 | 10 | 329 | 1 | 310 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
PDB | 3f55_D | 0 | 10 | 332 | 2 | 316 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
PDB | 3f55_C | 0 | 10 | 332 | 2 | 316 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
PDB | 3f55_B | 0 | 10 | 332 | 2 | 316 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
PDB | 3f55_A | 0 | 10 | 332 | 2 | 316 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
EST Download unfiltered results here | ||||
---|---|---|---|---|
Hit | Length | Start | End | EValue |
GE476981 | 318 | 81 | 395 | 0 |
FE490332 | 271 | 18 | 288 | 0 |
FE450235 | 271 | 18 | 288 | 0 |
FE458082 | 255 | 9 | 263 | 0 |
GO371467 | 288 | 141 | 425 | 0 |
Sequence Alignments (This image is cropped. Click for full image.) |
---|