Basic Information | |
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Species | Selaginella moellendorffii |
Cazyme ID | 76256 |
Family | CBM43 |
Protein Properties | Length: 411 Molecular Weight: 44283.4 Isoelectric Point: 4.3807 |
View CDS |
External Links |
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NCBI Taxonomy |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
CBM43 | 333 | 410 | 1.6e-30 |
CVANPNASFTDLQIALDWACGPGHADCQAIQPGQSCYLPDTVASHASYAFNSYFQSNGMDPSACDFSGAAAVTIADPS | |||
GH17 | 1 | 320 | 0 |
VGVCYGRNGDNLPSPQVAVQLIQAQSITKVRIFSYDAETLQAFANTQIELVIGTTNAQVVDFGQSQGDAADWVTRNVAAALPATKIVAIAVGSEVITSAP NAAGYLVAAMTNIYSALQQAGIDKQVKVSTPLSMGVLGTSFPPSSATFDPRFSAVMQSLLEFLSRTGSYLMANVYPYYAYRNDMRYISSDFALFRPNQGF TDSDSGLHYWNLFDAQLDALYYAMAAYNHREILIVVSETGWPSMGNADEVNVVNLDNAASYNGNLIKHLSNGSGTPFRPGITTDTYIFELFNEDLREGPT SNRNWGLFKPDGTKVYNLDF |
Full Sequence |
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Protein Sequence Length: 411 Download |
VGVCYGRNGD NLPSPQVAVQ LIQAQSITKV RIFSYDAETL QAFANTQIEL VIGTTNAQVV 60 DFGQSQGDAA DWVTRNVAAA LPATKIVAIA VGSEVITSAP NAAGYLVAAM TNIYSALQQA 120 GIDKQVKVST PLSMGVLGTS FPPSSATFDP RFSAVMQSLL EFLSRTGSYL MANVYPYYAY 180 RNDMRYISSD FALFRPNQGF TDSDSGLHYW NLFDAQLDAL YYAMAAYNHR EILIVVSETG 240 WPSMGNADEV NVVNLDNAAS YNGNLIKHLS NGSGTPFRPG ITTDTYIFEL FNEDLREGPT 300 SNRNWGLFKP DGTKVYNLDF GNSVVVQRNR SFCVANPNAS FTDLQIALDW ACGPGHADCQ 360 AIQPGQSCYL PDTVASHASY AFNSYFQSNG MDPSACDFSG AAAVTIADPS * 420 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
COG5309 | COG5309 | 0.0009 | 2 | 294 | 301 | + Exo-beta-1,3-glucanase [Carbohydrate transport and metabolism] | ||
pfam07983 | X8 | 3.0e-21 | 331 | 402 | 77 | + X8 domain. The X8 domain domain contains at least 6 conserved cysteine residues that presumably form three disulphide bridges. The domain is found in an Olive pollen allergen as well as at the C-terminus of several families of glycosyl hydrolases. This domain may be involved in carbohydrate binding. This domain is characteristic of GPI-anchored domains. | ||
smart00768 | X8 | 7.0e-37 | 331 | 410 | 80 | + Possibly involved in carbohydrate binding. The X8 domain, which may be involved in carbohydrate binding, is found in an Olive pollen antigen as well as at the C terminus of family 17 glycosyl hydrolases. It contains 6 conserved cysteine residues which presumably form three disulfide bridges. | ||
pfam00332 | Glyco_hydro_17 | 3.0e-97 | 1 | 320 | 320 | + Glycosyl hydrolases family 17. |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | EAZ13481.1 | 0 | 1 | 410 | 23 | 441 | hypothetical protein OsJ_03397 [Oryza sativa Japonica Group] |
GenBank | EEC71452.1 | 0 | 1 | 410 | 23 | 441 | hypothetical protein OsI_03677 [Oryza sativa Indica Group] |
RefSeq | NP_001044198.1 | 0 | 1 | 410 | 23 | 441 | Os01g0739700 [Oryza sativa (japonica cultivar-group)] |
RefSeq | XP_002283473.1 | 0 | 1 | 410 | 26 | 443 | PREDICTED: similar to beta-1,3-glucanase [Vitis vinifera] |
RefSeq | XP_002456331.1 | 0 | 1 | 410 | 27 | 445 | hypothetical protein SORBIDRAFT_03g034100 [Sorghum bicolor] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 2cyg_A | 0 | 1 | 320 | 1 | 312 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
PDB | 3ur8_B | 0 | 1 | 320 | 3 | 314 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
PDB | 3ur8_A | 0 | 1 | 320 | 3 | 314 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
PDB | 3ur7_B | 0 | 1 | 320 | 3 | 314 | A Chain A, Higher-density Crystal Structure Of Potato Endo-1,3-beta-glucanase |
PDB | 3ur7_A | 0 | 1 | 320 | 3 | 314 | A Chain A, Higher-density Crystal Structure Of Potato Endo-1,3-beta-glucanase |
EST Download unfiltered results here | ||||
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Hit | Length | Start | End | EValue |
GE476981 | 315 | 72 | 379 | 0 |
HO782823 | 431 | 10 | 410 | 0 |
GO370513 | 293 | 84 | 366 | 0 |
DR946401 | 289 | 106 | 385 | 0 |
HO781349 | 404 | 21 | 410 | 0 |
Sequence Alignments (This image is cropped. Click for full image.) |
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