| Basic Information | |
|---|---|
| Species | Arabidopsis lyrata |
| Cazyme ID | 855811 |
| Family | GH51 |
| Protein Properties | Length: 243 Molecular Weight: 26393.7 Isoelectric Point: 6.3609 |
| View CDS | |
| External Links |
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| NCBI Taxonomy |
| Plaza |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
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| Family | Start | End | Evalue |
| GH51 | 9 | 235 | 5.3e-36 |
| MYHQFDRTSRSGPKAFVSEYAVTGKDAGTGSLLASLAEAAFLIGLEKNSDIVEMASYAPLFVNTNDRRWNPDAIVFNSSHLYGTPSYWVQRFFAESSGAT LLTSTLKGNSTSLVASAISWENNGKDYIRIKLQAVNFGANSVNMKVLVTGLDPNVMRVTGSKKTVLTSTNVMDENSFSQPEKVVPHESLLEMAEEDMTVV LPPHSFSSFDLLKESAKIKMPISDSSS | |||
| Full Sequence |
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| Protein Sequence Length: 243 Download |
| TSASNLFSMY HQFDRTSRSG PKAFVSEYAV TGKDAGTGSL LASLAEAAFL IGLEKNSDIV 60 EMASYAPLFV NTNDRRWNPD AIVFNSSHLY GTPSYWVQRF FAESSGATLL TSTLKGNSTS 120 LVASAISWEN NGKDYIRIKL QAVNFGANSV NMKVLVTGLD PNVMRVTGSK KTVLTSTNVM 180 DENSFSQPEK VVPHESLLEM AEEDMTVVLP PHSFSSFDLL KESAKIKMPI SDSSSHQKTT 240 TV* |
| Functional Domains Download unfiltered results here | ||||||||
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| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| COG3534 | AbfA | 0.0003 | 55 | 215 | 180 | + Alpha-L-arabinofuranosidase [Carbohydrate transport and metabolism] | ||
| pfam06964 | Alpha-L-AF_C | 2.0e-38 | 51 | 213 | 173 | + Alpha-L-arabinofuranosidase C-terminus. This family represents the C-terminus (approximately 200 residues) of bacterial and eukaryotic alpha-L-arabinofuranosidase (EC:3.2.1.55). This catalyzes the hydrolysis of nonreducing terminal alpha-L-arabinofuranosidic linkages in L-arabinose-containing polysaccharides. | ||
| smart00813 | Alpha-L-AF_C | 8.0e-47 | 26 | 213 | 201 | + Alpha-L-arabinofuranosidase C-terminus. This entry represents the C terminus (approximately 200 residues) of bacterial and eukaryotic alpha-L-arabinofuranosidase. This catalyses the hydrolysis of non-reducing terminal alpha-L-arabinofuranosidic linkages in L-arabinose-containing polysaccharides. | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0046373 | L-arabinose metabolic process |
| GO:0046556 | alpha-N-arabinofuranosidase activity |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | AAK50089.1 | 0 | 1 | 242 | 439 | 678 | AF372949_1 AT3g10740/T7M13_18 [Arabidopsis thaliana] |
| GenBank | AAO92261.1 | 0 | 1 | 242 | 439 | 678 | alpha-L-arabinofuranosidase [Arabidopsis thaliana] |
| DDBJ | BAD93969.1 | 0 | 1 | 242 | 41 | 280 | putative alpha-L-arabinofuranosidase [Arabidopsis thaliana] |
| DDBJ | BAD95302.1 | 0 | 1 | 242 | 153 | 392 | putative alpha-L-arabinofuranosidase [Arabidopsis thaliana] |
| RefSeq | NP_187685.1 | 0 | 1 | 242 | 439 | 678 | ASD1 (ALPHA-L-ARABINOFURANOSIDASE 1); alpha-N-arabinofuranosidase/ hydrolase, acting on glycosyl bonds / xylan 1,4-beta-xylosidase [Arabidopsis thaliana] |
| Hydropathy |
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| EST Download unfiltered results here | ||||
|---|---|---|---|---|
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| Hit | Length | Start | End | EValue |
| FD560948 | 235 | 2 | 235 | 0 |
| ES909013 | 213 | 23 | 235 | 0 |
| DK567520 | 215 | 22 | 235 | 0 |
| GR443359 | 203 | 1 | 203 | 0 |
| EG487213 | 192 | 52 | 243 | 0 |
| Sequence Alignments (This image is cropped. Click for full image.) |
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