Basic Information | |
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Species | Arabidopsis lyrata |
Cazyme ID | 858221 |
Family | GH9 |
Protein Properties | Length: 621 Molecular Weight: 69139.8 Isoelectric Point: 9.18 |
View CDS |
External Links |
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NCBI Taxonomy |
Plaza |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GH9 | 108 | 583 | 0 |
NYTIALPIALKFFNAQQSGKLPKNNNSVKWRGDSCLQDGKGDPGQYYKDLVGGYYDAGDSIKFNFPMSYAMTMLSWSVIEYSAKYEAAGELDHVKELIKW GTDYFLKTFNSSADIIYEMVEQVGSGVSGGGSVLHNDHYCWMRPEDIHYKRIVYQCYSSCSDLAAEMAAALASASIVLKDNRLYSEKLVHGAKTLYKFAT FNKNRYSTPGKESSKFYNSSMYEDELLWGGAWLYYATGNVTYLEGVTSHYMAKKAGAFGNSPYYGVFSWDNKLPGAQLLLTRMRLFLSPGYPYEELLSAF HNQTGRVMCSYLPYYKKFNRTSGGLIQLNHGAPQPLQYVANAAFLAALFSDYLDAADTPGWYCGPNFYTTELLRDFSRSQIDYILGKNPRKMSYVVGYGQ RYPKQVHHRGASIPKNKRETCTGGLKWKKSKKGNPNTIDGAMVAGPDKHDGFHDVRSNYNYTEPTLAGNAGLVAAL |
Full Sequence |
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Protein Sequence Length: 621 Download |
MYGRDPWGGP LEINAADSLT DDDRSRNLQD LDRATPSRPL DETQQSWLLG PKVLKKKKYV 60 DLGCILVSRK IFLWTLGIIV VTALLSGFIT LIVKTLPHHK PKKPPLDNYT IALPIALKFF 120 NAQQSGKLPK NNNSVKWRGD SCLQDGKGDP GQYYKDLVGG YYDAGDSIKF NFPMSYAMTM 180 LSWSVIEYSA KYEAAGELDH VKELIKWGTD YFLKTFNSSA DIIYEMVEQV GSGVSGGGSV 240 LHNDHYCWMR PEDIHYKRIV YQCYSSCSDL AAEMAAALAS ASIVLKDNRL YSEKLVHGAK 300 TLYKFATFNK NRYSTPGKES SKFYNSSMYE DELLWGGAWL YYATGNVTYL EGVTSHYMAK 360 KAGAFGNSPY YGVFSWDNKL PGAQLLLTRM RLFLSPGYPY EELLSAFHNQ TGRVMCSYLP 420 YYKKFNRTSG GLIQLNHGAP QPLQYVANAA FLAALFSDYL DAADTPGWYC GPNFYTTELL 480 RDFSRSQIDY ILGKNPRKMS YVVGYGQRYP KQVHHRGASI PKNKRETCTG GLKWKKSKKG 540 NPNTIDGAMV AGPDKHDGFH DVRSNYNYTE PTLAGNAGLV AALVALSGEK PVGGIDKNTM 600 FSAVPPLPMA TPPPPAPWTP * |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
PLN00119 | PLN00119 | 5.0e-105 | 73 | 571 | 510 | + endoglucanase | ||
PLN02171 | PLN02171 | 9.0e-107 | 108 | 572 | 476 | + endoglucanase | ||
PLN02340 | PLN02340 | 8.0e-109 | 108 | 572 | 479 | + endoglucanase | ||
PLN02345 | PLN02345 | 5.0e-133 | 112 | 572 | 470 | + endoglucanase | ||
pfam00759 | Glyco_hydro_9 | 2.0e-150 | 108 | 572 | 474 | + Glycosyl hydrolase family 9. |
Gene Ontology | |
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GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0005975 | carbohydrate metabolic process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | AAK59818.1 | 0 | 1 | 604 | 1 | 605 | AT5g49720/K2I5_8 [Arabidopsis thaliana] |
GenBank | AAN72232.1 | 0 | 1 | 604 | 1 | 605 | At5g49720/K2I5_8 [Arabidopsis thaliana] |
EMBL | CAB51903.1 | 0 | 1 | 604 | 1 | 605 | cellulase; endo-1,4-beta-D-glucanase [Brassica napus] |
RefSeq | NP_194157.1 | 0 | 1 | 609 | 1 | 609 | ATGH9A3 (ARABIDOPSIS THALIANA GLYCOSYL HYDROLASE 9A3); catalytic/ hydrolase, hydrolyzing O-glycosyl compounds [Arabidopsis thaliana] |
RefSeq | NP_199783.1 | 0 | 1 | 604 | 1 | 605 | ATGH9A1 (ARABIDOPSIS THALIANA GLYCOSYL HYDROLASE 9A1); cellulase/ hydrolase, hydrolyzing O-glycosyl compounds [Arabidopsis thaliana] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1ksd_A | 0 | 108 | 586 | 4 | 428 | A Chain A, Crystal Structure Of The R3 Form Of Pectate Lyase A, Erwinia Chrysanthemi |
PDB | 1ksc_A | 0 | 108 | 586 | 4 | 428 | A Chain A, Crystal Structure Of The R3 Form Of Pectate Lyase A, Erwinia Chrysanthemi |
PDB | 1ks8_A | 0 | 108 | 586 | 4 | 428 | A Chain A, The Structure Of Endoglucanase From Termite, Nasutitermes Takasagoensis, At Ph 2.5. |
PDB | 2xfg_A | 0 | 96 | 586 | 9 | 459 | B Chain B, Reassembly And Co-Crystallization Of A Family 9 Processive Endoglucanase From Separately Expressed Gh9 And Cbm3c Modules |
PDB | 4tf4_B | 0 | 105 | 589 | 2 | 443 | B Chain B, Reassembly And Co-Crystallization Of A Family 9 Processive Endoglucanase From Separately Expressed Gh9 And Cbm3c Modules |