| Basic Information | |
|---|---|
| Species | Arabidopsis lyrata |
| Cazyme ID | 859154 |
| Family | CE8 |
| Protein Properties | Length: 714 Molecular Weight: 80184.8 Isoelectric Point: 9.8242 |
| View CDS | |
| External Links |
|---|
| NCBI Taxonomy |
| Plaza |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| CE8 | 403 | 698 | 0 |
| DVVVAKDGSGKCKTIAQALAMVPMKNTKKFVIHIKQGVYKEKVEVTKKMLHVMFVGDGPTKTIITGDIAFLPNQVGTYRTASVAVNGDYFMAKDIGFENT AGAARHQAVALRVSADFAVFFNCHMNGYQDTLYVHTHRQFYRNCRVSGTIDFVFGDAKAVFQNCEFVIRRPMEHQQCIVTAQGRKDRRETTGIVIHNSRI TGDASYLPVKAKNRAFLGRPWKEFSRTIIMNTEIDDVIDPEGWLKWNETFALNTLFYTEYRNRGRGSGQGRRVRWRGIKRISDRVAREFAPGNFLR | |||
| Full Sequence |
|---|
| Protein Sequence Length: 714 Download |
| MKKYVLLGLT ALLMAMVICV EANDGSSPSR KMEEIHRESK LMITKTAVTI ICSSTDYKQD 60 CTTSLATVRS PDPRNLIRSA FDLAIVSIRS GIDRGMIDLK SRADADVHTR NALNTCRELM 120 DDAIDDLRKT RDKFRGFLFT RLSDFVEDLC VWLSGSITYQ QTCIDGFEGI DSEAAMMMER 180 VMRKGQRLTS NGLAIAANLD KLLKAFRIPF PFLRSRRDRL GILGSGSSRD QSVGSSQDPP 240 PNVDSSDNSP KTMESSENRP LDSSENRPSD SSNNRPLDSS ENRPKESSEN SPQKLTSSEN 300 QPLDSSDKLP QKSTSSENQP LDSLESNPQK STSTENRPLD PTQNSDSSII RPLDPLRKLN 360 PLNKLDSSKD RHLSEEGEFP PWVTRHSRRL LARGPRNNGI RADVVVAKDG SGKCKTIAQA 420 LAMVPMKNTK KFVIHIKQGV YKEKVEVTKK MLHVMFVGDG PTKTIITGDI AFLPNQVGTY 480 RTASVAVNGD YFMAKDIGFE NTAGAARHQA VALRVSADFA VFFNCHMNGY QDTLYVHTHR 540 QFYRNCRVSG TIDFVFGDAK AVFQNCEFVI RRPMEHQQCI VTAQGRKDRR ETTGIVIHNS 600 RITGDASYLP VKAKNRAFLG RPWKEFSRTI IMNTEIDDVI DPEGWLKWNE TFALNTLFYT 660 EYRNRGRGSG QGRRVRWRGI KRISDRVARE FAPGNFLRGN TWIPQTRIPY NAN* 720 |
| Functional Domains Download unfiltered results here | ||||||
|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description |
| PLN02217 | PLN02217 | 3.0e-25 | 2 | 217 | 221 | + probable pectinesterase/pectinesterase inhibitor |
| PLN02990 | PLN02990 | 2.0e-45 | 2 | 208 | 210 | + Probable pectinesterase/pectinesterase inhibitor |
| PLN02217 | PLN02217 | 1.0e-126 | 371 | 710 | 340 | + probable pectinesterase/pectinesterase inhibitor |
| PLN02990 | PLN02990 | 6.0e-159 | 373 | 713 | 341 | + Probable pectinesterase/pectinesterase inhibitor |
| pfam01095 | Pectinesterase | 1.0e-180 | 403 | 700 | 299 | + Pectinesterase. |
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0004857 | enzyme inhibitor activity |
| GO:0005618 | cell wall |
| GO:0030599 | pectinesterase activity |
| GO:0042545 | cell wall modification |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| RefSeq | NP_193333.1 | 0 | 1 | 713 | 1 | 701 | pectinesterase family protein [Arabidopsis thaliana] |
| RefSeq | NP_199729.1 | 4e-36 | 46 | 208 | 53 | 217 | pectinesterase family protein [Arabidopsis thaliana] |
| RefSeq | NP_199729.1 | 0 | 371 | 713 | 230 | 569 | pectinesterase family protein [Arabidopsis thaliana] |
| RefSeq | XP_002314364.1 | 1e-26 | 33 | 217 | 45 | 227 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002314364.1 | 0 | 359 | 712 | 215 | 566 | predicted protein [Populus trichocarpa] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 1gq8_A | 0 | 403 | 711 | 8 | 316 | A Chain A, Pectin Methylesterase From Carrot |
| PDB | 1xg2_A | 0 | 400 | 710 | 1 | 311 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
| PDB | 1qjv_B | 1e-28 | 403 | 704 | 5 | 339 | A Chain A, Pectin Methylesterase Pema From Erwinia Chrysanthemi |
| PDB | 1qjv_A | 1e-28 | 403 | 704 | 5 | 339 | A Chain A, Pectin Methylesterase Pema From Erwinia Chrysanthemi |
| PDB | 2ntq_B | 2e-28 | 403 | 704 | 5 | 339 | A Chain A, Pectin Methylesterase Pema From Erwinia Chrysanthemi |
