Basic Information | |
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Species | Arabidopsis lyrata |
Cazyme ID | 862304 |
Family | CE8 |
Protein Properties | Length: 337 Molecular Weight: 37341.7 Isoelectric Point: 9.5321 |
View CDS |
External Links |
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NCBI Taxonomy |
Plaza |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
CE8 | 34 | 324 | 0 |
VFVDQSGHGNFRTIQKAIDSVPINNTHWFFINVKAGLYREKIVIPQKKPFIVIVGAGKRLTRVEWDDHDSLAQSPTFATLADNTVVKSITFANSYNFPSK GKMNKNPRVPAVAAFIGGDKSAFYSVGFAGIQDTLWDSDGRHYFHRCTIQGAVDFILGGGQSIYQSCVIQVLGGQLEPAGTEGYITAQGRNNPYDANGFV FINCLVYGTGKAYLGRAWRPYSRVIFYNSNLTDVVVPRGWWEWNQTGYEKQLIFAEHGCFGSGSNTGKRVKWVKKLSGSAVQQLTDLSFIN |
Full Sequence |
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Protein Sequence Length: 337 Download |
MGTHRIIIGL VALCCFCLPH LIEAKPFGVY QRQVFVDQSG HGNFRTIQKA IDSVPINNTH 60 WFFINVKAGL YREKIVIPQK KPFIVIVGAG KRLTRVEWDD HDSLAQSPTF ATLADNTVVK 120 SITFANSYNF PSKGKMNKNP RVPAVAAFIG GDKSAFYSVG FAGIQDTLWD SDGRHYFHRC 180 TIQGAVDFIL GGGQSIYQSC VIQVLGGQLE PAGTEGYITA QGRNNPYDAN GFVFINCLVY 240 GTGKAYLGRA WRPYSRVIFY NSNLTDVVVP RGWWEWNQTG YEKQLIFAEH GCFGSGSNTG 300 KRVKWVKKLS GSAVQQLTDL SFINRGGWLE NLPIPV* |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
PLN02432 | PLN02432 | 2.0e-81 | 36 | 329 | 294 | + putative pectinesterase | ||
PLN02682 | PLN02682 | 7.0e-82 | 32 | 331 | 314 | + pectinesterase family protein | ||
PLN02480 | PLN02480 | 8.0e-86 | 32 | 329 | 300 | + Probable pectinesterase | ||
PLN02176 | PLN02176 | 6.0e-105 | 34 | 334 | 301 | + putative pectinesterase | ||
PLN02497 | PLN02497 | 0 | 1 | 334 | 334 | + probable pectinesterase |
Gene Ontology | |
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GO Term | Description |
GO:0005618 | cell wall |
GO:0030599 | pectinesterase activity |
GO:0042545 | cell wall modification |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
DDBJ | BAB01354.1 | 0 | 1 | 335 | 1 | 330 | pectin methylesterase-like protein [Arabidopsis thaliana] |
EMBL | CBI40838.1 | 0 | 10 | 333 | 21 | 341 | unnamed protein product [Vitis vinifera] |
RefSeq | NP_189055.1 | 0 | 1 | 335 | 1 | 334 | pectinesterase family protein [Arabidopsis thaliana] |
RefSeq | NP_197400.1 | 0 | 1 | 336 | 1 | 330 | pectinesterase family protein [Arabidopsis thaliana] |
RefSeq | XP_002323773.1 | 0 | 34 | 334 | 1 | 289 | predicted protein [Populus trichocarpa] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1gq8_A | 3.00004e-41 | 34 | 335 | 9 | 314 | A Chain A, Pectin Methylesterase From Carrot |
PDB | 1xg2_A | 1e-30 | 36 | 305 | 7 | 277 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
PDB | 2ntq_B | 3e-17 | 29 | 333 | 3 | 342 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
PDB | 2ntq_A | 3e-17 | 29 | 333 | 3 | 342 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
PDB | 2ntp_B | 3e-17 | 29 | 333 | 3 | 342 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |