Basic Information | |
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Species | Arabidopsis lyrata |
Cazyme ID | 869363 |
Family | CBM43 |
Protein Properties | Length: 233 Molecular Weight: 24661.7 Isoelectric Point: 4.7369 |
View CDS |
External Links |
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NCBI Taxonomy |
Plaza |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
CBM43 | 83 | 165 | 5.8e-34 |
WCVARENVAKMALQAALDYACGIGGADCSEIQEGGNCYNPNSLRAHASFAFNSYYQKNPIPSSCNFDGTAVTISADPSLGSCH |
Full Sequence |
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Protein Sequence Length: 233 Download |
MGKGFRLVTS LLLLSFLFSS GTKASIEPIE EEKDITTPLA TNPTTTPTTV VPNSDSDASA 60 VATTPLTIPS PPHGVAYPGD QSWCVARENV AKMALQAALD YACGIGGADC SEIQEGGNCY 120 NPNSLRAHAS FAFNSYYQKN PIPSSCNFDG TAVTISADPS LGSCHFPSTS TSESILNVTS 180 EDGLGLFGRI PSHPTPKPEA STSSTTTFSF LYFYSRLLCF CFYIHLISMT LI* 240 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
pfam07983 | X8 | 9.0e-22 | 82 | 153 | 78 | + X8 domain. The X8 domain domain contains at least 6 conserved cysteine residues that presumably form three disulphide bridges. The domain is found in an Olive pollen allergen as well as at the C-terminus of several families of glycosyl hydrolases. This domain may be involved in carbohydrate binding. This domain is characteristic of GPI-anchored domains. | ||
smart00768 | X8 | 1.0e-37 | 82 | 166 | 86 | + Possibly involved in carbohydrate binding. The X8 domain, which may be involved in carbohydrate binding, is found in an Olive pollen antigen as well as at the C terminus of family 17 glycosyl hydrolases. It contains 6 conserved cysteine residues which presumably form three disulfide bridges. |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
RefSeq | NP_001031450.1 | 0 | 1 | 230 | 1 | 227 | unknown protein [Arabidopsis thaliana] |
RefSeq | NP_001118420.1 | 0 | 1 | 160 | 1 | 159 | unknown protein [Arabidopsis thaliana] |
RefSeq | XP_002283721.1 | 9.80909e-45 | 83 | 188 | 99 | 204 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002441577.1 | 4.99997e-41 | 7 | 180 | 9 | 171 | hypothetical protein SORBIDRAFT_09g029700 [Sorghum bicolor] |
RefSeq | XP_002512573.1 | 3.00004e-41 | 16 | 166 | 151 | 308 | hydrolase, hydrolyzing O-glycosyl compounds, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 2jon_A | 8e-17 | 82 | 170 | 12 | 100 | A Chain A, Solution Structure Of The C-Terminal Domain Ole E 9 |