| Basic Information | |
|---|---|
| Species | Arabidopsis lyrata |
| Cazyme ID | 870958 |
| Family | GH1 |
| Protein Properties | Length: 540 Molecular Weight: 62287.3 Isoelectric Point: 6.8788 |
| View CDS | |
| External Links |
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| NCBI Taxonomy |
| Plaza |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| GH1 | 16 | 492 | 0 |
| RSDFPEGFLFGTASSAYQYEGAVNDASRGLSVWDTFVRKHPERNCYSDADQAVEFYHHYKEDIQRMKDINMDSFRFSISWPRILPHGKKSRGVNKEGIKF YNDLIDELLANRITPLATLFHWDTPQALEDEYNGFLSEKVVDDFRDFATICFEEFGDRVKYWVTLNEPWVYSIGGYDTGRKAPGRASKYMNEAALAGESG REVYNVSHNLLLAHAEAVEVFRDNPKCKDGKIGIAHCPVWFEPYDSNCPKDQEAVERAMEFMFGWHMDPTVYGDYPEVMKKLIGKRLPSFTAAQSKKLKG SFDFVGANYYSAFYVKNVVDVDPNIPDWRSDAHIEWKKQNKAGQTLGPRGGSEWDFLYPQGLRKFLVYAKNRYGSPNFMITENGHCDLDYEKKAKLSNLM DLQRTEYHKIHLQSIHQAIKEDGVQVEGYYAWSLLDNCEWNAGYGVRYGLFYVDYNNGLKRYPKMSAMWFKEFLKKE | |||
| Full Sequence |
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| Protein Sequence Length: 540 Download |
| MIQGKKIYAD KSSFGRSDFP EGFLFGTASS AYQYEGAVND ASRGLSVWDT FVRKHPERNC 60 YSDADQAVEF YHHYKEDIQR MKDINMDSFR FSISWPRILP HGKKSRGVNK EGIKFYNDLI 120 DELLANRITP LATLFHWDTP QALEDEYNGF LSEKVVDDFR DFATICFEEF GDRVKYWVTL 180 NEPWVYSIGG YDTGRKAPGR ASKYMNEAAL AGESGREVYN VSHNLLLAHA EAVEVFRDNP 240 KCKDGKIGIA HCPVWFEPYD SNCPKDQEAV ERAMEFMFGW HMDPTVYGDY PEVMKKLIGK 300 RLPSFTAAQS KKLKGSFDFV GANYYSAFYV KNVVDVDPNI PDWRSDAHIE WKKQNKAGQT 360 LGPRGGSEWD FLYPQGLRKF LVYAKNRYGS PNFMITENGH CDLDYEKKAK LSNLMDLQRT 420 EYHKIHLQSI HQAIKEDGVQ VEGYYAWSLL DNCEWNAGYG VRYGLFYVDY NNGLKRYPKM 480 SAMWFKEFLK KEDIEDSEKE GSLNFVVNKK RKRFLTSSGS FSCFIPKMSE SSKALELLF* 540 600 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| PLN02849 | PLN02849 | 3.0e-120 | 12 | 492 | 491 | + beta-glucosidase | ||
| PLN02814 | PLN02814 | 5.0e-121 | 8 | 490 | 490 | + beta-glucosidase | ||
| COG2723 | BglB | 1.0e-136 | 19 | 499 | 487 | + Beta-glucosidase/6-phospho-beta-glucosidase/beta-galactosidase [Carbohydrate transport and metabolism] | ||
| TIGR03356 | BGL | 2.0e-139 | 20 | 485 | 469 | + beta-galactosidase. | ||
| pfam00232 | Glyco_hydro_1 | 3.0e-164 | 19 | 491 | 477 | + Glycosyl hydrolase family 1. | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
| GO:0005975 | carbohydrate metabolic process |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | AAG23719.1 | 0 | 16 | 536 | 28 | 551 | beta-glucosidase [Arabidopsis thaliana] |
| EMBL | CAB75927.1 | 0 | 7 | 539 | 1 | 534 | beta-glucosidase-like protein [Arabidopsis thaliana] |
| RefSeq | NP_181977.1 | 0 | 1 | 497 | 1 | 500 | PEN2 (PENETRATION 2); hydrolase, hydrolyzing O-glycosyl compounds / thioglucosidase [Arabidopsis thaliana] |
| RefSeq | NP_191571.4 | 0 | 1 | 539 | 1 | 540 | BGLU27 (BETA GLUCOSIDASE 27); catalytic/ cation binding / hydrolase, hydrolyzing O-glycosyl compounds [Arabidopsis thaliana] |
| RefSeq | NP_191573.1 | 0 | 16 | 536 | 28 | 551 | DIN2 (DARK INDUCIBLE 2); catalytic/ cation binding / hydrolase, hydrolyzing O-glycosyl compounds [Arabidopsis thaliana] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 3ptq_B | 0 | 9 | 491 | 24 | 505 | A Chain A, X-Ray Crystal Structure Of Tdp-Vancosaminyltransferase Gtfd As A Complex With Tdp And The Natural Substrate, Desvancosaminyl Vancomycin. |
| PDB | 3ptq_A | 0 | 9 | 491 | 24 | 505 | A Chain A, X-Ray Crystal Structure Of Tdp-Vancosaminyltransferase Gtfd As A Complex With Tdp And The Natural Substrate, Desvancosaminyl Vancomycin. |
| PDB | 3ptm_B | 0 | 9 | 491 | 24 | 505 | A Chain A, X-Ray Crystal Structure Of Tdp-Vancosaminyltransferase Gtfd As A Complex With Tdp And The Natural Substrate, Desvancosaminyl Vancomycin. |
| PDB | 3ptm_A | 0 | 9 | 491 | 24 | 505 | A Chain A, X-Ray Crystal Structure Of Tdp-Vancosaminyltransferase Gtfd As A Complex With Tdp And The Natural Substrate, Desvancosaminyl Vancomycin. |
| PDB | 3ptk_B | 0 | 9 | 491 | 24 | 505 | A Chain A, The Crystal Structure Of Rice (Oryza Sativa L.) Os4bglu12 |
| Hydropathy |
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| EST Download unfiltered results here | ||||
|---|---|---|---|---|
| Hit | Length | Start | End | EValue |
| DV643299 | 241 | 225 | 465 | 0 |
| HO794849 | 473 | 10 | 480 | 0 |
| FG227815 | 478 | 16 | 490 | 0 |
| FY428283 | 276 | 70 | 345 | 0 |
| EE466996 | 222 | 260 | 481 | 0 |
| Sequence Alignments (This image is cropped. Click for full image.) |
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