| Basic Information | |
|---|---|
| Species | Arabidopsis lyrata |
| Cazyme ID | 872461 |
| Family | GH5 |
| Protein Properties | Length: 416 Molecular Weight: 46650.2 Isoelectric Point: 9.1531 |
| View CDS | |
| External Links |
|---|
| NCBI Taxonomy |
| Plaza |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| GH5 | 42 | 366 | 8.3e-34 |
| NGKPFYANGFNAYWLAYEATDPTTRFKITYVFQNATIHGLTIARTWGFRDGGYRALQIAPGVYDEKTFQGLDFAIAEAKRLGIKMIITFVNNYSDFGGRK QYVDWAKTTGQNVSSDDDFYTNPLVKQYYKNHVKTMVNRVNTFTKVAYKDEPTIMGWELMNEPQCRADPSGKTLMAWINEMAPYVKSVDSKHLLSTGLEG FYGDSSPQRMTSLNPVAANVLGTDFIANHNLDAIDFASIHSYPDLWFPNLDEKSRLDFLRKWLVDHLEDAQNILRKPLILGEFGKPTNIPGYTQAQRDAV FNATFDTIYESAQKGGPAAGALFWH | |||
| Full Sequence |
|---|
| Protein Sequence Length: 416 Download |
| MKYLCLIVFL AIVIAQNSSY LGVKAVSSDG FVSRKGVQFI LNGKPFYANG FNAYWLAYEA 60 TDPTTRFKIT YVFQNATIHG LTIARTWGFR DGGYRALQIA PGVYDEKTFQ GLDFAIAEAK 120 RLGIKMIITF VNNYSDFGGR KQYVDWAKTT GQNVSSDDDF YTNPLVKQYY KNHVKTMVNR 180 VNTFTKVAYK DEPTIMGWEL MNEPQCRADP SGKTLMAWIN EMAPYVKSVD SKHLLSTGLE 240 GFYGDSSPQR MTSLNPVAAN VLGTDFIANH NLDAIDFASI HSYPDLWFPN LDEKSRLDFL 300 RKWLVDHLED AQNILRKPLI LGEFGKPTNI PGYTQAQRDA VFNATFDTIY ESAQKGGPAA 360 GALFWHVISD GMNNFKDPLS IVLSENSTTV NIITEESRKL GLIRGKGLSK KLKFK* 420 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| pfam12876 | Cellulase-like | 0.0003 | 188 | 271 | 93 | + Sugar-binding cellulase-like. This is a putative cellulase family. | ||
| pfam00150 | Cellulase | 5.0e-5 | 101 | 325 | 233 | + Cellulase (glycosyl hydrolase family 5). | ||
| COG3934 | COG3934 | 3.0e-31 | 34 | 365 | 334 | + Endo-beta-mannanase [Carbohydrate transport and metabolism] | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
| GO:0005975 | carbohydrate metabolic process |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | ABB45852.1 | 0 | 1 | 404 | 1 | 402 | hypothetical protein [Thellungiella halophila] |
| RefSeq | NP_187700.1 | 0 | 1 | 413 | 1 | 413 | (1-4)-beta-mannan endohydrolase, putative [Arabidopsis thaliana] |
| RefSeq | NP_187701.1 | 0 | 1 | 403 | 1 | 402 | (1-4)-beta-mannan endohydrolase, putative [Arabidopsis thaliana] |
| RefSeq | NP_189675.1 | 0 | 1 | 351 | 1 | 334 | (1-4)-beta-mannan endohydrolase family [Arabidopsis thaliana] |
| RefSeq | NP_201447.1 | 0 | 1 | 404 | 1 | 401 | (1-4)-beta-mannan endohydrolase, putative [Arabidopsis thaliana] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 1rh9_A | 0 | 27 | 400 | 2 | 369 | A Chain A, Family Gh5 Endo-Beta-Mannanase From Lycopersicon Esculentum (Tomato) |
| PDB | 3pzq_A | 0 | 30 | 404 | 13 | 377 | A Chain A, Family Gh5 Endo-Beta-Mannanase From Lycopersicon Esculentum (Tomato) |
| PDB | 3pzo_A | 0 | 30 | 404 | 13 | 377 | A Chain A, Family Gh5 Endo-Beta-Mannanase From Lycopersicon Esculentum (Tomato) |
| PDB | 3pzn_A | 0 | 30 | 404 | 13 | 377 | A Chain A, Family Gh5 Endo-Beta-Mannanase From Lycopersicon Esculentum (Tomato) |
| PDB | 3pzm_A | 0 | 30 | 404 | 13 | 377 | A Chain A, Family Gh5 Endo-Beta-Mannanase From Lycopersicon Esculentum (Tomato) |
