Basic Information | |
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Species | Arabidopsis lyrata |
Cazyme ID | 876414 |
Family | CE8 |
Protein Properties | Length: 343 Molecular Weight: 38358.8 Isoelectric Point: 8.3252 |
View CDS |
External Links |
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NCBI Taxonomy |
Plaza |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
CE8 | 2 | 326 | 0 |
DGTGDYKTVMEAIIAAPVNSKLRYIIYVKKGIYNEIVKIEDTKTNLIIIGDGRDDTILSGNLNANDGIKTYDSATLASYIFYDSSNETMTSFFIRVQIRF FFVWHRVLPISEPGLFMAQDICIRNTAGPAKGQAVALRVSAEAVVIHRCRIEAYQDSLYAHWGKQFYSECYITGTVDFICGHATAVFQHCQIEARKPKFG QSNVITAHSRTNPSDKSGFSIQKCNITASSELAPVRGTIKTYLGRPWGNFSRVIFLESFMDALIDPAGYIPWNKSDIETLSTLSYIEYKNKGLGAVTTNR VQWKGFKVMTDPKEAIKFTVGKFIN |
Full Sequence |
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Protein Sequence Length: 343 Download |
MDGTGDYKTV MEAIIAAPVN SKLRYIIYVK KGIYNEIVKI EDTKTNLIII GDGRDDTILS 60 GNLNANDGIK TYDSATLASY IFYDSSNETM TSFFIRVQIR FFFVWHRVLP ISEPGLFMAQ 120 DICIRNTAGP AKGQAVALRV SAEAVVIHRC RIEAYQDSLY AHWGKQFYSE CYITGTVDFI 180 CGHATAVFQH CQIEARKPKF GQSNVITAHS RTNPSDKSGF SIQKCNITAS SELAPVRGTI 240 KTYLGRPWGN FSRVIFLESF MDALIDPAGY IPWNKSDIET LSTLSYIEYK NKGLGAVTTN 300 RVQWKGFKVM TDPKEAIKFT VGKFINQDFW LNSTGVPYED GL* |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
PLN02201 | PLN02201 | 1.0e-107 | 2 | 342 | 341 | + probable pectinesterase/pectinesterase inhibitor | ||
PLN02468 | PLN02468 | 1.0e-108 | 2 | 342 | 341 | + putative pectinesterase/pectinesterase inhibitor | ||
PLN02301 | PLN02301 | 8.0e-137 | 2 | 342 | 341 | + pectinesterase/pectinesterase inhibitor | ||
PLN02488 | PLN02488 | 1.0e-142 | 2 | 342 | 342 | + probable pectinesterase/pectinesterase inhibitor | ||
pfam01095 | Pectinesterase | 2.0e-149 | 2 | 325 | 324 | + Pectinesterase. |
Gene Ontology | |
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GO Term | Description |
GO:0005618 | cell wall |
GO:0030599 | pectinesterase activity |
GO:0042545 | cell wall modification |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | AAC28220.1 | 0 | 2 | 342 | 222 | 536 | Similar to pectinesterase; T24M8.6 [Arabidopsis thaliana] |
GenBank | AAF16638.1 | 0 | 2 | 342 | 221 | 551 | AC011661_16 T23J18.25 [Arabidopsis thaliana] |
RefSeq | NP_172625.3 | 0 | 2 | 342 | 221 | 524 | pectin methylesterase, putative [Arabidopsis thaliana] |
RefSeq | NP_189437.1 | 0 | 2 | 342 | 194 | 497 | pectinesterase family protein [Arabidopsis thaliana] |
RefSeq | NP_192302.3 | 0 | 2 | 342 | 221 | 524 | enzyme inhibitor/ pectinesterase [Arabidopsis thaliana] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1xg2_A | 0 | 2 | 342 | 10 | 315 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
PDB | 1gq8_A | 0 | 2 | 342 | 14 | 319 | A Chain A, Pectin Methylesterase From Carrot |
PDB | 1qjv_B | 2e-19 | 7 | 325 | 18 | 334 | A Chain A, Pectin Methylesterase Pema From Erwinia Chrysanthemi |
PDB | 1qjv_A | 2e-19 | 7 | 325 | 18 | 334 | A Chain A, Pectin Methylesterase Pema From Erwinia Chrysanthemi |
PDB | 2ntq_B | 2e-19 | 7 | 325 | 18 | 334 | A Chain A, Pectin Methylesterase Pema From Erwinia Chrysanthemi |
EST Download unfiltered results here | ||||
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Hit | Length | Start | End | EValue |
JG606995 | 339 | 5 | 343 | 0 |
HO777316 | 342 | 2 | 343 | 0 |
EB452110 | 311 | 2 | 312 | 0 |
DV711860 | 320 | 2 | 321 | 0 |
GO241843 | 312 | 5 | 316 | 0 |
Sequence Alignments (This image is cropped. Click for full image.) |
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