Basic Information | |
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Species | Arabidopsis lyrata |
Cazyme ID | 877890 |
Family | GH17 |
Protein Properties | Length: 389 Molecular Weight: 43085.3 Isoelectric Point: 7.6728 |
View CDS |
External Links |
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NCBI Taxonomy |
Plaza |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GH17 | 29 | 338 | 0 |
VGVCDGRNGDNLPSPAQIVSLYKKINVAGIRLYEPVPDLIVSLQGTGLLVAIGPKNEEIKTLAEHYEFALNWVKTFIAPYKNVAFNWITVGNEVIEGEIG RYVPQAMKNIKAALTEIGNSKIHVTTVISTAALANSYPPSAGVFKPAITELITEIVSILSSTDSPLMVNVYPYFAYASDPTQVSLEYATFRSTSPVVTDG KYQYTNIFDATLDAFNAALEKINHGSVKVYVAETGWPTRGNVPYTSVENARAYNQGLLKKLTTGHKGTPRRPNVPVMTFFFEMFNEDLKEGEVEKSFGFF NPDMAPVYDM |
Full Sequence |
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Protein Sequence Length: 389 Download |
MSNSTVFLVI TLLFILARLT AARNMNPFVG VCDGRNGDNL PSPAQIVSLY KKINVAGIRL 60 YEPVPDLIVS LQGTGLLVAI GPKNEEIKTL AEHYEFALNW VKTFIAPYKN VAFNWITVGN 120 EVIEGEIGRY VPQAMKNIKA ALTEIGNSKI HVTTVISTAA LANSYPPSAG VFKPAITELI 180 TEIVSILSST DSPLMVNVYP YFAYASDPTQ VSLEYATFRS TSPVVTDGKY QYTNIFDATL 240 DAFNAALEKI NHGSVKVYVA ETGWPTRGNV PYTSVENARA YNQGLLKKLT TGHKGTPRRP 300 NVPVMTFFFE MFNEDLKEGE VEKSFGFFNP DMAPVYDMWN INVSSYDKEG YSWVIWTMLI 360 ITNNVELFRL SPKSGPRNNN KYNGLKAH* |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
COG5309 | COG5309 | 6.0e-6 | 116 | 331 | 231 | + Exo-beta-1,3-glucanase [Carbohydrate transport and metabolism] | ||
pfam00332 | Glyco_hydro_17 | 1.0e-94 | 29 | 337 | 312 | + Glycosyl hydrolases family 17. |
Gene Ontology | |
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GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0005975 | carbohydrate metabolic process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | ABN05913.1 | 0 | 5 | 338 | 8 | 335 | Glycoside hydrolase, family 17 [Medicago truncatula] |
RefSeq | NP_177901.1 | 0 | 6 | 360 | 1 | 358 | glycosyl hydrolase family 17 protein [Arabidopsis thaliana] |
RefSeq | NP_177902.1 | 0 | 7 | 339 | 8 | 342 | glycosyl hydrolase family 17 protein [Arabidopsis thaliana] |
RefSeq | XP_002302261.1 | 0 | 29 | 342 | 7 | 320 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002306606.1 | 0 | 30 | 339 | 1 | 309 | predicted protein [Populus trichocarpa] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 2cyg_A | 0 | 29 | 338 | 1 | 310 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
PDB | 1ghr_A | 0 | 29 | 336 | 1 | 302 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
PDB | 1aq0_B | 0 | 29 | 336 | 1 | 302 | A Chain A, Barley 1,3-1,4-Beta-Glucanase In Monoclinic Space Group |
PDB | 1aq0_A | 0 | 29 | 336 | 1 | 302 | A Chain A, Barley 1,3-1,4-Beta-Glucanase In Monoclinic Space Group |
PDB | 3f55_D | 0 | 29 | 344 | 2 | 316 | A Chain A, Barley 1,3-1,4-Beta-Glucanase In Monoclinic Space Group |