y
Basic Information | |
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Species | Arabidopsis lyrata |
Cazyme ID | 878699 |
Family | CE8 |
Protein Properties | Length: 404 Molecular Weight: 44568.2 Isoelectric Point: 8.2693 |
View CDS |
External Links |
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NCBI Taxonomy |
Plaza |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
CE8 | 102 | 393 | 0 |
CVDKNGCCNFTTVQSAVDAVGNFSQRRNVIWINSGMYYEKVVIPKTKPNITLQGQGFETTAIAWNDTAYSANGTFYCASVQVFGSQFVAKNISFMNVAPI PKPGDVGAQAVAIRIAGDESAFVGCGFFGAQDTLHDDRGRHYFKDCYIQGSIDFIFGNAKSLYQDCRIISMANQVSPGSKAVNGAVTANGRSSKDENSGF SFVNCTIGGTGHVWLGRAWRPYSRVVFVSTTMTDVIAPEGWNNFNDPSRDATIFYGEYNCSGPGADMSKRAAYVQKLNETQVALLINTSYID |
Full Sequence |
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Protein Sequence Length: 404 Download |
MKYRRISLSL SIGIAIIAIL ASKPLFKTHP EAVMHNPFDI LHGIKSISYS VKKSFYGHHH 60 HHHHNHHHHH HRPSDTKKKV SICDDFPKNI PPLDTDTTSY LCVDKNGCCN FTTVQSAVDA 120 VGNFSQRRNV IWINSGMYYE KVVIPKTKPN ITLQGQGFET TAIAWNDTAY SANGTFYCAS 180 VQVFGSQFVA KNISFMNVAP IPKPGDVGAQ AVAIRIAGDE SAFVGCGFFG AQDTLHDDRG 240 RHYFKDCYIQ GSIDFIFGNA KSLYQDCRII SMANQVSPGS KAVNGAVTAN GRSSKDENSG 300 FSFVNCTIGG TGHVWLGRAW RPYSRVVFVS TTMTDVIAPE GWNNFNDPSR DATIFYGEYN 360 CSGPGADMSK RAAYVQKLNE TQVALLINTS YIDGDQWLQF SDL* 420 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
PLN02432 | PLN02432 | 2.0e-92 | 92 | 399 | 308 | + putative pectinesterase | ||
PLN02634 | PLN02634 | 8.0e-98 | 100 | 402 | 310 | + probable pectinesterase | ||
PLN02665 | PLN02665 | 2.0e-104 | 103 | 398 | 297 | + pectinesterase family protein | ||
PLN02682 | PLN02682 | 6.0e-122 | 101 | 399 | 306 | + pectinesterase family protein | ||
PLN02304 | PLN02304 | 0 | 23 | 403 | 381 | + probable pectinesterase |
Gene Ontology | |
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GO Term | Description |
GO:0005618 | cell wall |
GO:0030599 | pectinesterase activity |
GO:0042545 | cell wall modification |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | AAB71446.1 | 0 | 18 | 403 | 16 | 391 | Similar to Prunus pectinesterase (gb |
GenBank | ABN08648.1 | 0 | 10 | 399 | 9 | 388 | Pectinesterase [Medicago truncatula] |
RefSeq | NP_172023.1 | 0 | 18 | 403 | 16 | 393 | pectinesterase family protein [Arabidopsis thaliana] |
RefSeq | XP_002323171.1 | 0 | 22 | 399 | 2 | 376 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002521065.1 | 0 | 75 | 399 | 68 | 392 | Pectinesterase-1 precursor, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1gq8_A | 0 | 101 | 399 | 9 | 309 | A Chain A, Pectin Methylesterase From Carrot |
PDB | 1xg2_A | 8.00001e-41 | 102 | 374 | 6 | 277 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
PDB | 3uw0_A | 5e-16 | 130 | 386 | 62 | 357 | A Chain A, Pectin Methylesterase From Yersinia Enterocolitica |
PDB | 2ntq_B | 0.00000000000004 | 98 | 384 | 2 | 326 | A Chain A, Pectin Methylesterase From Yersinia Enterocolitica |
PDB | 2ntq_A | 0.00000000000004 | 98 | 384 | 2 | 326 | A Chain A, Pectin Methylesterase From Yersinia Enterocolitica |