| Basic Information | |
|---|---|
| Species | Arabidopsis lyrata |
| Cazyme ID | 879428 |
| Family | CBM43 |
| Protein Properties | Length: 485 Molecular Weight: 53330.6 Isoelectric Point: 4.9804 |
| View CDS | |
| External Links |
|---|
| NCBI Taxonomy |
| Plaza |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| CBM43 | 382 | 459 | 6e-32 |
| CIAMDGVDAKTLQAALDWACGPGRSNCSEIQPGESCYQPNNVKGHASFAFNSYYQKEGRASGSCDFKGVAMITTTDPE | |||
| GH17 | 44 | 363 | 0 |
| VGFNIGTDVSNLLSPTELVKFLQTQKVNHVRLYDADPELLKALAKTKIRVIISVPNNQLLAIGSSNSTAASWIGRNVVAYYPETLITAISVGDEVLTTVP SSAPLLLPAIESLYNALVASNLHTQIKVSTPHAASIMLDTFPPSQAYFNQTWHSIMVPLLQFLSKTGSPLMMNLYPYYVYMQNKGVVPLDNCLFEPLTPS KEMVDPNTLLHYTNVLDAMVDAAYVSMKNLNVSDVVVLVTESGWPSKGDSKEPYATIDNADTYNSNLIKHVFDRTGTPLHPEMTSSVYIYELFNEDLRAS PVSEASWGLFYANSTPVYLL | |||
| Full Sequence |
|---|
| Protein Sequence Length: 485 Download |
| MAFTSMVSTV PVLFFFFTLL LVSANSSSLS HDIKVQEQDK DPFVGFNIGT DVSNLLSPTE 60 LVKFLQTQKV NHVRLYDADP ELLKALAKTK IRVIISVPNN QLLAIGSSNS TAASWIGRNV 120 VAYYPETLIT AISVGDEVLT TVPSSAPLLL PAIESLYNAL VASNLHTQIK VSTPHAASIM 180 LDTFPPSQAY FNQTWHSIMV PLLQFLSKTG SPLMMNLYPY YVYMQNKGVV PLDNCLFEPL 240 TPSKEMVDPN TLLHYTNVLD AMVDAAYVSM KNLNVSDVVV LVTESGWPSK GDSKEPYATI 300 DNADTYNSNL IKHVFDRTGT PLHPEMTSSV YIYELFNEDL RASPVSEASW GLFYANSTPV 360 YLLHVSGSGT FLANDTTNQT YCIAMDGVDA KTLQAALDWA CGPGRSNCSE IQPGESCYQP 420 NNVKGHASFA FNSYYQKEGR ASGSCDFKGV AMITTTDPEM LMFQVMEAAF SREARRSEIG 480 HRQW* 540 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| COG5309 | COG5309 | 3.0e-7 | 276 | 356 | 84 | + Exo-beta-1,3-glucanase [Carbohydrate transport and metabolism] | ||
| pfam07983 | X8 | 2.0e-24 | 380 | 452 | 78 | + X8 domain. The X8 domain domain contains at least 6 conserved cysteine residues that presumably form three disulphide bridges. The domain is found in an Olive pollen allergen as well as at the C-terminus of several families of glycosyl hydrolases. This domain may be involved in carbohydrate binding. This domain is characteristic of GPI-anchored domains. | ||
| smart00768 | X8 | 7.0e-39 | 380 | 458 | 79 | + Possibly involved in carbohydrate binding. The X8 domain, which may be involved in carbohydrate binding, is found in an Olive pollen antigen as well as at the C terminus of family 17 glycosyl hydrolases. It contains 6 conserved cysteine residues which presumably form three disulfide bridges. | ||
| pfam00332 | Glyco_hydro_17 | 6.0e-86 | 44 | 361 | 318 | + Glycosyl hydrolases family 17. | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
| GO:0005975 | carbohydrate metabolic process |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | AAC17632.1 | 0 | 1 | 461 | 1 | 461 | Similar to glucan endo-1,3-beta-D-glucosidase precursor gb |
| EMBL | CBI23232.1 | 0 | 14 | 458 | 17 | 461 | unnamed protein product [Vitis vinifera] |
| RefSeq | XP_002316541.1 | 0 | 56 | 458 | 1 | 403 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002332610.1 | 0 | 56 | 458 | 1 | 403 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002518468.1 | 0 | 41 | 458 | 47 | 464 | Glucan endo-1,3-beta-glucosidase precursor, putative [Ricinus communis] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 2cyg_A | 0 | 44 | 363 | 1 | 310 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
| PDB | 3ur8_B | 0 | 44 | 366 | 3 | 315 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
| PDB | 3ur8_A | 0 | 44 | 366 | 3 | 315 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
| PDB | 3ur7_B | 0 | 44 | 366 | 3 | 315 | A Chain A, Higher-density Crystal Structure Of Potato Endo-1,3-beta-glucanase |
| PDB | 3ur7_A | 0 | 44 | 366 | 3 | 315 | A Chain A, Higher-density Crystal Structure Of Potato Endo-1,3-beta-glucanase |
