Basic Information | |
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Species | Arabidopsis lyrata |
Cazyme ID | 880670 |
Family | CE8 |
Protein Properties | Length: 553 Molecular Weight: 61070 Isoelectric Point: 9.5941 |
View CDS |
External Links |
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NCBI Taxonomy |
Plaza |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
CE8 | 249 | 537 | 0 |
LVVAKDGSGHYTSIQQAVNAAAKLPRRNTRLVIYVKAGVYKENVVIKKSIKNVMVIGDGIDSTIVTGNKNVKDGTTTFRSATFAVSGSGFIARGISFENT AGPEKHQAVALRSGSDFSVFYDCSFKGYQDTLYLHSRRQFLRNCNIYGTVDFIFGDATAILQNCNIYARKPMSGQKNTITAQSRKDPNENTGFVVQSSTV ATASETYLGRPWKSYSRTVFMKCNLGALVNPAGWLPWNGEFALSTLYYGEYANTGAGASVSGRVKWPGYHVLKTATEAGKFTVENFLDG |
Full Sequence |
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Protein Sequence Length: 553 Download |
MDHKLLLTFP KCVYTKCIIT IIYVVSISHL NAHFITSCKQ TPYPSVCDHH MSNSPLKTLD 60 DQTDGFTFHD LVVSSTMDHA VQLHRLVSTV KQRHSLHKHA RSALFDCLEL YEDTIDQLNH 120 SRRSYGQYSS PHDRQTALSA AIANQDTCRN GFKDFNLTSS YSKYFPVQIH RNLTKSLSNS 180 LAVTKAAAEA VAEKYPSTGF TKFSKQRSSG GGGGRRRLLM FSDDKFPSWF PLSDRKLLED 240 SETTVKADLV VAKDGSGHYT SIQQAVNAAA KLPRRNTRLV IYVKAGVYKE NVVIKKSIKN 300 VMVIGDGIDS TIVTGNKNVK DGTTTFRSAT FAVSGSGFIA RGISFENTAG PEKHQAVALR 360 SGSDFSVFYD CSFKGYQDTL YLHSRRQFLR NCNIYGTVDF IFGDATAILQ NCNIYARKPM 420 SGQKNTITAQ SRKDPNENTG FVVQSSTVAT ASETYLGRPW KSYSRTVFMK CNLGALVNPA 480 GWLPWNGEFA LSTLYYGEYA NTGAGASVSG RVKWPGYHVL KTATEAGKFT VENFLDGNYW 540 ITAAGVPVND GL* |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
PLN02916 | PLN02916 | 1.0e-156 | 103 | 552 | 460 | + pectinesterase family protein | ||
PLN02201 | PLN02201 | 1.0e-158 | 102 | 552 | 470 | + probable pectinesterase/pectinesterase inhibitor | ||
PLN02301 | PLN02301 | 4.0e-163 | 17 | 552 | 564 | + pectinesterase/pectinesterase inhibitor | ||
PLN02713 | PLN02713 | 5.0e-166 | 36 | 552 | 539 | + Probable pectinesterase/pectinesterase inhibitor | ||
pfam01095 | Pectinesterase | 0 | 248 | 538 | 300 | + Pectinesterase. |
Gene Ontology | |
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GO Term | Description |
GO:0004857 | enzyme inhibitor activity |
GO:0005618 | cell wall |
GO:0030599 | pectinesterase activity |
GO:0042545 | cell wall modification |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
EMBL | CAN77092.1 | 0 | 4 | 552 | 3 | 507 | hypothetical protein [Vitis vinifera] |
RefSeq | NP_173733.1 | 0 | 1 | 552 | 1 | 554 | pectinesterase family protein [Arabidopsis thaliana] |
RefSeq | XP_002314796.1 | 0 | 21 | 552 | 16 | 531 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002318285.1 | 0 | 15 | 552 | 3 | 520 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002527782.1 | 0 | 16 | 552 | 3 | 529 | Pectinesterase-1 precursor, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1gq8_A | 0 | 243 | 552 | 3 | 319 | A Chain A, Pectin Methylesterase From Carrot |
PDB | 1xg2_A | 0 | 245 | 552 | 1 | 315 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
PDB | 2ntq_B | 3e-20 | 250 | 509 | 7 | 314 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
PDB | 2ntq_A | 3e-20 | 250 | 509 | 7 | 314 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
PDB | 2ntp_B | 3e-20 | 250 | 509 | 7 | 314 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
EST Download unfiltered results here | ||||
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Hit | Length | Start | End | EValue |
HO778758 | 486 | 88 | 552 | 0 |
EC939603 | 285 | 278 | 553 | 0 |
DY923593 | 279 | 257 | 529 | 0 |
CD820002 | 213 | 219 | 431 | 0 |
DK472918 | 276 | 1 | 275 | 0 |
Sequence Alignments (This image is cropped. Click for full image.) |
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