| Basic Information | |
|---|---|
| Species | Arabidopsis lyrata |
| Cazyme ID | 881229 |
| Family | CBM43 |
| Protein Properties | Length: 231 Molecular Weight: 22197.2 Isoelectric Point: 4.2462 |
| View CDS | |
| External Links |
|---|
| NCBI Taxonomy |
| Plaza |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| CBM43 | 150 | 228 | 2.4e-32 |
| WCIAKANASPTSLQVALDYACGYGGADCGQIQQGAACYEPNTIRDHASFAFNSYYQKHPGSDSCNFGGAAQLTSTDPSK | |||
| Full Sequence |
|---|
| Protein Sequence Length: 231 Download |
| MTPHIAPRCF STIILLWLLY TSPLDVIAQG QGGQGDIPVV NPTAPGGSTT TPTITQPSPP 60 SLTFPGPTTP TTTPTGGYPP LDSTTPTGGY PPLYGTTPPG GGDVGGGGGG YGGGAPGGGG 120 GGDTGAGGGG GGYGGGGGDT GAGGGGSGQW CIAKANASPT SLQVALDYAC GYGGADCGQI 180 QQGAACYEPN TIRDHASFAF NSYYQKHPGS DSCNFGGAAQ LTSTDPSKTF * 240 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| pfam07983 | X8 | 2.0e-20 | 149 | 219 | 77 | + X8 domain. The X8 domain domain contains at least 6 conserved cysteine residues that presumably form three disulphide bridges. The domain is found in an Olive pollen allergen as well as at the C-terminus of several families of glycosyl hydrolases. This domain may be involved in carbohydrate binding. This domain is characteristic of GPI-anchored domains. | ||
| smart00768 | X8 | 1.0e-33 | 149 | 227 | 80 | + Possibly involved in carbohydrate binding. The X8 domain, which may be involved in carbohydrate binding, is found in an Olive pollen antigen as well as at the C terminus of family 17 glycosyl hydrolases. It contains 6 conserved cysteine residues which presumably form three disulfide bridges. | ||
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | AAG51737.1 | 0 | 1 | 229 | 1 | 227 | AC068667_16 beta-1,3 glucanase, putative; 26636-27432 [Arabidopsis thaliana] |
| GenBank | ABK94231.1 | 1e-35 | 13 | 228 | 48 | 225 | unknown [Populus trichocarpa] |
| RefSeq | NP_174231.2 | 0 | 1 | 228 | 1 | 226 | unknown protein [Arabidopsis thaliana] |
| RefSeq | XP_002316740.1 | 1e-34 | 148 | 227 | 1 | 80 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002519744.1 | 1e-33 | 148 | 228 | 113 | 193 | hydrolase, hydrolyzing O-glycosyl compounds, putative [Ricinus communis] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 2jon_A | 0.000000000000001 | 146 | 227 | 9 | 90 | A Chain A, Solution Structure Of The C-Terminal Domain Ole E 9 |
