| Basic Information | |
|---|---|
| Species | Arabidopsis lyrata |
| Cazyme ID | 882032 |
| Family | GH5 |
| Protein Properties | Length: 421 Molecular Weight: 46900.2 Isoelectric Point: 6.2501 |
| View CDS | |
| External Links |
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| NCBI Taxonomy |
| Plaza |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| GH5 | 12 | 321 | 2.4e-31 |
| IVDENGQRAKLMSCGGERTKQAKQPVDAVAKKIVEMSFNCVRLTWPSDLMTNETLAYNVTVRQSFQSFGLNDDIVGFKTNNPSIIDLSLIEAFICVTEVN VTFRTHNTRDLCLAFFLFCSKSNDVMVILDNHLTKPGWCCADNDGNDFSGDKFFDPTVWAAALSKMTATFDGVSNVVGMSLRNELTGPKQNVNDWFKYMQ QGAEAVHSANKNVLVILSGLTFDTDLSFVRCLPVNLSFTGKLVFELHWYSFSSKPERNSGGFLLNQGFPLFLSEFGMDKREINANDDRYFGCLTGWTAEN DVDWSIWALT | |||
| Full Sequence |
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| Protein Sequence Length: 421 Download |
| MTYPLSTSSR WIVDENGQRA KLMSCGGERT KQAKQPVDAV AKKIVEMSFN CVRLTWPSDL 60 MTNETLAYNV TVRQSFQSFG LNDDIVGFKT NNPSIIDLSL IEAFICVTEV NVTFRTHNTR 120 DLCLAFFLFC SKSNDVMVIL DNHLTKPGWC CADNDGNDFS GDKFFDPTVW AAALSKMTAT 180 FDGVSNVVGM SLRNELTGPK QNVNDWFKYM QQGAEAVHSA NKNVLVILSG LTFDTDLSFV 240 RCLPVNLSFT GKLVFELHWY SFSSKPERNS GGFLLNQGFP LFLSEFGMDK REINANDDRY 300 FGCLTGWTAE NDVDWSIWAL TGSYILNTSV RKSSFLEKIS LLQSTLQGPG PRTDDYNLVL 360 DPLTRLCLSS GPENLVKMTR TGCSGPGSKW QTDSASRMHL SSTTSNKLHF ALMWTQPTMS 420 * 480 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| pfam00150 | Cellulase | 8.0e-8 | 132 | 322 | 216 | + Cellulase (glycosyl hydrolase family 5). | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
| GO:0005975 | carbohydrate metabolic process |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | AAD31066.1 | 0 | 1 | 412 | 1 | 471 | AC007357_15 F3F19.15 [Arabidopsis thaliana] |
| RefSeq | NP_172772.2 | 0 | 1 | 412 | 31 | 501 | glycosyl hydrolase family 5 protein / cellulase family protein [Arabidopsis thaliana] |
| RefSeq | NP_189245.1 | 0 | 1 | 406 | 1 | 466 | glycosyl hydrolase family 5 protein / cellulase family protein [Arabidopsis thaliana] |
| RefSeq | XP_002315653.1 | 0 | 1 | 412 | 1 | 470 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002515055.1 | 0 | 4 | 403 | 33 | 451 | hydrolase, hydrolyzing O-glycosyl compounds, putative [Ricinus communis] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 1vrx_B | 0.0002 | 170 | 287 | 137 | 284 | A Chain A, Endocellulase E1 From Acidothermus Cellulolyticus Mutant Y245g |
| PDB | 1vrx_A | 0.0002 | 170 | 287 | 137 | 284 | A Chain A, Endocellulase E1 From Acidothermus Cellulolyticus Mutant Y245g |
| PDB | 1ece_B | 0.0002 | 170 | 287 | 137 | 284 | A Chain A, Acidothermus Cellulolyticus Endocellulase E1 Catalytic Domain In Complex With A Cellotetraose |
| PDB | 1ece_A | 0.0002 | 170 | 287 | 137 | 284 | A Chain A, Acidothermus Cellulolyticus Endocellulase E1 Catalytic Domain In Complex With A Cellotetraose |
| Hydropathy |
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| EST Download unfiltered results here | ||||
|---|---|---|---|---|
| Hit | Length | Start | End | EValue |
| DK465433 | 270 | 133 | 368 | 0 |
| EW715766 | 232 | 33 | 263 | 0 |
| DY905374 | 306 | 33 | 321 | 0 |
| DY977776 | 307 | 33 | 322 | 0 |
| FC879052 | 267 | 4 | 263 | 0 |
| Sequence Alignments (This image is cropped. Click for full image.) |
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