y
Basic Information | |
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Species | Arabidopsis lyrata |
Cazyme ID | 882513 |
Family | CE8 |
Protein Properties | Length: 516 Molecular Weight: 57254.6 Isoelectric Point: 6.6604 |
View CDS |
External Links |
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NCBI Taxonomy |
Plaza |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
CE8 | 421 | 499 | 4.2e-25 |
RPWRKYSTVVVLQSFIGDLVDPAGWTPWEGETGLSTLYYGEYQNMGPGAVTSKRVKWTGFRVLTDPNEAAKFTVSKLLD | |||
CE8 | 236 | 420 | 0 |
DVVVAKDGSGHYNTVNAAIAAAPEYSRKRFVIYIKTGVYDEIVRIGITKTNLTLIGDGQDSTIITGNLSCNVGRSTFYTATVASNGDGFIGIDMCFRNTA GPTKGQAVALRVSGDMSVIYRCRIEGYQDTLYPHQYRQFYRECFITGTVDFICGKAVAVFQFCQIVARQPRRGQSNVITAQSRES |
Full Sequence |
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Protein Sequence Length: 516 Download |
MLVHTKLSAV FIVIIMFSQA HSDLVRLEDD NINGFITTVI GVCKGYDDKQ SCQNILLELK 60 RVSSSLSEMK CRELLIIVLK NSVWRIDMAM IGVMEDTKLL EQMGNDMLGV KEDTNLFEEM 120 MESAKNRMIR SVEELLGGES LNLGSYENVH TWLSGVLTSY ITCIDGIGEG AYKRRVEPEL 180 EDLISRARVA LAIFISISPR DDTELKSVVS NGPSWLSNVD KKCLYLNPEV LKKNADVVVA 240 KDGSGHYNTV NAAIAAAPEY SRKRFVIYIK TGVYDEIVRI GITKTNLTLI GDGQDSTIIT 300 GNLSCNVGRS TFYTATVASN GDGFIGIDMC FRNTAGPTKG QAVALRVSGD MSVIYRCRIE 360 GYQDTLYPHQ YRQFYRECFI TGTVDFICGK AVAVFQFCQI VARQPRRGQS NVITAQSRES 420 RPWRKYSTVV VLQSFIGDLV DPAGWTPWEG ETGLSTLYYG EYQNMGPGAV TSKRVKWTGF 480 RVLTDPNEAA KFTVSKLLDG ESWLKASGVP YEKGL* 540 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
PLN02745 | PLN02745 | 2.0e-122 | 42 | 515 | 527 | + Putative pectinesterase/pectinesterase inhibitor | ||
PLN02468 | PLN02468 | 4.0e-128 | 7 | 515 | 551 | + putative pectinesterase/pectinesterase inhibitor | ||
pfam01095 | Pectinesterase | 2.0e-159 | 236 | 501 | 298 | + Pectinesterase. | ||
PLN02488 | PLN02488 | 0 | 39 | 515 | 509 | + probable pectinesterase/pectinesterase inhibitor | ||
PLN02301 | PLN02301 | 0 | 42 | 515 | 508 | + pectinesterase/pectinesterase inhibitor |
Gene Ontology | |
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GO Term | Description |
GO:0004857 | enzyme inhibitor activity |
GO:0005618 | cell wall |
GO:0030599 | pectinesterase activity |
GO:0042545 | cell wall modification |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | AAC28220.1 | 0 | 39 | 515 | 17 | 536 | Similar to pectinesterase; T24M8.6 [Arabidopsis thaliana] |
GenBank | AAF16638.1 | 0 | 39 | 515 | 17 | 551 | AC011661_16 T23J18.25 [Arabidopsis thaliana] |
GenBank | ABK28620.1 | 0 | 39 | 515 | 17 | 524 | unknown [Arabidopsis thaliana] |
RefSeq | NP_172625.3 | 0 | 39 | 515 | 17 | 524 | pectin methylesterase, putative [Arabidopsis thaliana] |
RefSeq | NP_192302.3 | 0 | 39 | 515 | 17 | 524 | enzyme inhibitor/ pectinesterase [Arabidopsis thaliana] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1xg2_A | 0 | 235 | 515 | 3 | 315 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
PDB | 1gq8_A | 0 | 236 | 515 | 8 | 319 | A Chain A, Pectin Methylesterase From Carrot |
PDB | 3uw0_A | 1e-18 | 234 | 403 | 32 | 220 | A Chain A, Pectin Methylesterase From Yersinia Enterocolitica |
PDB | 1qjv_B | 2e-16 | 236 | 498 | 5 | 334 | A Chain A, Pectin Methylesterase Pema From Erwinia Chrysanthemi |
PDB | 1qjv_A | 2e-16 | 236 | 498 | 5 | 334 | A Chain A, Pectin Methylesterase Pema From Erwinia Chrysanthemi |