Basic Information | |
---|---|
Species | Arabidopsis lyrata |
Cazyme ID | 882522 |
Family | CE8 |
Protein Properties | Length: 511 Molecular Weight: 56552.7 Isoelectric Point: 5.6436 |
View CDS |
External Links |
---|
NCBI Taxonomy |
Plaza |
CAZyDB |
Signature Domain Download full data set without filtering | |||
---|---|---|---|
Family | Start | End | Evalue |
CE8 | 199 | 494 | 0 |
DVVVAKDGIGDYNTLNEAIAVVPEYSRKRFVIYIKTGVYDEIVRIGSTKANLTLIGDGQDSTIITGNLSYNDGKTTFQTATVASNGNGFIGIDMCFRNTA GPAKGPAVALRVSGDMSVIYRCRIDGYQDALYSQRDRQFYRECFITGTTDFICGNAAAVFQFCQIVARLPMKGHSNVITAQSRTSMEDNSGFSIQKCNIT ASSDLDPVKATVKTYLGRPWRNYSTVVVLQSFIGDLVDPAGWTPWKGETGLSTLYYGEYQNSGLGAVTSKRVKWTGFRVITDPKEATTFTVTKLLD |
Full Sequence |
---|
Protein Sequence Length: 511 Download |
MVIGVCKGYD NKQSCQNLLL ELKTVSSSLS KMRCRDLLII VLKNSVWRID MAMIGVMEDT 60 KLLEEMENDM LGVKEDTNLF EEMMESAKDR IIRSVEELLR GESHNLGSYE NVHTWLSGVL 120 TSYITCIDEI GEGAYKRRVE PVLEDLISRA RVALAIFISI SPIDDTELKS VVPNGPSWLS 180 NVDKKYLYLN PEVLKKIADV VVAKDGIGDY NTLNEAIAVV PEYSRKRFVI YIKTGVYDEI 240 VRIGSTKANL TLIGDGQDST IITGNLSYND GKTTFQTATV ASNGNGFIGI DMCFRNTAGP 300 AKGPAVALRV SGDMSVIYRC RIDGYQDALY SQRDRQFYRE CFITGTTDFI CGNAAAVFQF 360 CQIVARLPMK GHSNVITAQS RTSMEDNSGF SIQKCNITAS SDLDPVKATV KTYLGRPWRN 420 YSTVVVLQSF IGDLVDPAGW TPWKGETGLS TLYYGEYQNS GLGAVTSKRV KWTGFRVITD 480 PKEATTFTVT KLLDGESWLK ASGVPYEKGL * |
Functional Domains Download unfiltered results here | ||||||||
---|---|---|---|---|---|---|---|---|
Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
PLN02745 | PLN02745 | 4.0e-139 | 5 | 510 | 527 | + Putative pectinesterase/pectinesterase inhibitor | ||
PLN02468 | PLN02468 | 5.0e-144 | 54 | 510 | 470 | + putative pectinesterase/pectinesterase inhibitor | ||
PLN02488 | PLN02488 | 0 | 2 | 510 | 509 | + probable pectinesterase/pectinesterase inhibitor | ||
PLN02301 | PLN02301 | 0 | 5 | 510 | 508 | + pectinesterase/pectinesterase inhibitor | ||
pfam01095 | Pectinesterase | 0 | 199 | 496 | 298 | + Pectinesterase. |
Gene Ontology | |
---|---|
GO Term | Description |
GO:0004857 | enzyme inhibitor activity |
GO:0005618 | cell wall |
GO:0030599 | pectinesterase activity |
GO:0042545 | cell wall modification |
Annotations - NR Download unfiltered results here | |||||||
---|---|---|---|---|---|---|---|
Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | AAC28220.1 | 0 | 1 | 510 | 16 | 536 | Similar to pectinesterase; T24M8.6 [Arabidopsis thaliana] |
GenBank | AAF16638.1 | 0 | 1 | 510 | 16 | 551 | AC011661_16 T23J18.25 [Arabidopsis thaliana] |
GenBank | ABK28620.1 | 0 | 1 | 510 | 16 | 524 | unknown [Arabidopsis thaliana] |
RefSeq | NP_172625.3 | 0 | 1 | 510 | 16 | 524 | pectin methylesterase, putative [Arabidopsis thaliana] |
RefSeq | NP_192302.3 | 0 | 1 | 510 | 16 | 524 | enzyme inhibitor/ pectinesterase [Arabidopsis thaliana] |
Annotations - PDB Download unfiltered results here | |||||||
---|---|---|---|---|---|---|---|
Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1xg2_A | 0 | 197 | 510 | 2 | 315 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
PDB | 1gq8_A | 0 | 199 | 510 | 8 | 319 | A Chain A, Pectin Methylesterase From Carrot |
PDB | 2ntq_B | 2e-16 | 210 | 493 | 18 | 334 | A Chain A, Pectin Methylesterase From Carrot |
PDB | 2ntq_A | 2e-16 | 210 | 493 | 18 | 334 | A Chain A, Pectin Methylesterase From Carrot |
PDB | 2ntp_B | 2e-16 | 210 | 493 | 18 | 334 | A Chain A, Pectin Methylesterase From Carrot |
EST Download unfiltered results here | ||||
---|---|---|---|---|
Hit | Length | Start | End | EValue |
HO777316 | 434 | 82 | 511 | 0 |
DV711860 | 315 | 175 | 489 | 0 |
CV886778 | 281 | 231 | 511 | 0 |
DT759654 | 297 | 176 | 472 | 0 |
EB452110 | 279 | 202 | 480 | 0 |
Sequence Alignments (This image is cropped. Click for full image.) |
---|