Basic Information | |
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Species | Arabidopsis lyrata |
Cazyme ID | 882630 |
Family | CE8 |
Protein Properties | Length: 367 Molecular Weight: 40564.8 Isoelectric Point: 5.7147 |
View CDS |
External Links |
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NCBI Taxonomy |
Plaza |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
CE8 | 54 | 350 | 0 |
LIVSQDGTGDYKTINEAVAAAPTGSKTRFIIYVKRGTYKEIVHIGELKTHLTIVGDGSDATILTGSLNFKDGTKTFDSATVAIDGDWFMAQDLWIQNTAG PAKGQAVALRVSGNYVVIYQCRIDAYQDTLYAHSNTQFYRDCFITGTVDFICGRASAVFQNCQIEARKPTEGQSNVITAQQRGKDDKHSGFTFQNCSIKA SSDLAPLKRMVKTFLGRPWGDLSTVVFMESYMDDLIDPTGWTPWNSSTTRRLSTIFYGEYRNKGPGANTNQRVDWKGFKVITDPIEAGKFTVGEFIN |
Full Sequence |
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Protein Sequence Length: 367 Download |
MEIQLSVFIL SLIPFFALAS STSDVIEMVV PSDDFPSWLT DFNPTKTLRG HADLIVSQDG 60 TGDYKTINEA VAAAPTGSKT RFIIYVKRGT YKEIVHIGEL KTHLTIVGDG SDATILTGSL 120 NFKDGTKTFD SATVAIDGDW FMAQDLWIQN TAGPAKGQAV ALRVSGNYVV IYQCRIDAYQ 180 DTLYAHSNTQ FYRDCFITGT VDFICGRASA VFQNCQIEAR KPTEGQSNVI TAQQRGKDDK 240 HSGFTFQNCS IKASSDLAPL KRMVKTFLGR PWGDLSTVVF MESYMDDLID PTGWTPWNSS 300 TTRRLSTIFY GEYRNKGPGA NTNQRVDWKG FKVITDPIEA GKFTVGEFIN RDSWLNATGV 360 PFYEGL* |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
PLN02314 | PLN02314 | 4.0e-128 | 32 | 362 | 339 | + pectinesterase | ||
PLN02468 | PLN02468 | 4.0e-129 | 28 | 366 | 343 | + putative pectinesterase/pectinesterase inhibitor | ||
PLN02488 | PLN02488 | 8.0e-154 | 10 | 366 | 364 | + probable pectinesterase/pectinesterase inhibitor | ||
PLN02301 | PLN02301 | 8.0e-166 | 1 | 366 | 376 | + pectinesterase/pectinesterase inhibitor | ||
pfam01095 | Pectinesterase | 2.0e-167 | 53 | 349 | 297 | + Pectinesterase. |
Gene Ontology | |
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GO Term | Description |
GO:0005618 | cell wall |
GO:0030599 | pectinesterase activity |
GO:0042545 | cell wall modification |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
EMBL | CAD29733.1 | 0 | 34 | 366 | 218 | 554 | pectin methylesterase [Sesbania rostrata] |
RefSeq | NP_172624.1 | 0 | 2 | 366 | 198 | 557 | PMEPCRA (METHYLESTERASE PCR A); enzyme inhibitor/ pectinesterase [Arabidopsis thaliana] |
Swiss-Prot | Q1JPL7 | 0 | 2 | 366 | 198 | 557 | PME18_ARATH RecName: Full=Pectinesterase/pectinesterase inhibitor 18; AltName: Full=AtPMEpcrA; Contains: RecName: Full=Pectinesterase inhibitor 18; AltName: Full=Pectin methylesterase inhibitor 18; Contains: RecName: Full=Bifunctional pectinesterase 18/rRNA N-glycosylase; Short=PE 18; AltName: Full=Ribosome-inactivating protein; AltName: Full=Pectin methylesterase 18; AltName: Full=Pectin methylesterase 4; Short=AtPME4; Flags: Precursor |
RefSeq | XP_002266980.1 | 0 | 11 | 366 | 173 | 528 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002518523.1 | 0 | 11 | 366 | 192 | 547 | Pectinesterase precursor, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1xg2_A | 0 | 52 | 366 | 3 | 315 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
PDB | 1gq8_A | 0 | 53 | 366 | 8 | 319 | A Chain A, Pectin Methylesterase From Carrot |
PDB | 2ntq_B | 1e-22 | 64 | 324 | 18 | 315 | A Chain A, Pectin Methylesterase From Carrot |
PDB | 2ntq_A | 1e-22 | 64 | 324 | 18 | 315 | A Chain A, Pectin Methylesterase From Carrot |
PDB | 2ntp_B | 1e-22 | 64 | 324 | 18 | 315 | A Chain A, Pectin Methylesterase From Carrot |