Basic Information | |
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Species | Arabidopsis lyrata |
Cazyme ID | 882686 |
Family | CE8 |
Protein Properties | Length: 535 Molecular Weight: 59547 Isoelectric Point: 7.3666 |
View CDS |
External Links |
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NCBI Taxonomy |
Plaza |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
CE8 | 199 | 518 | 0 |
FVVAKDGSGNYNTVNAAIAAAPEHGRKRFVIYIKTGVYDEIVRIGSMKTNLTLIGDGQDSTIITGNLSCNDGKSTFQTATVVYSFLFFIPNYYILNNHNY TKHTIAASNGDGFIGIDMCFRNTAGPAKGQAVALRVSGDISVIYRCRIEGYQDTLYPHRHRQFYREFFITGTVDFICGNAAAVFQFCQIVARQPRKGQSN VITAQSRESEDDNSGFSIQKCNITTSPDLDLVKATVKTFFGRPWKKYSTVVILQSFIGDLVDPAGWTPWEGTTGLSTLYYGEYQNMGPGAVTSKRVKWRG FRVLTDPNEAAKLTVSKLLD |
Full Sequence |
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Protein Sequence Length: 535 Download |
MHAVCKGYDD KQSCQNLLLE LKRVSSSLSE MRCCDLLIII LKNSVWRIDM AMIGVMEDTK 60 LLEEMENDML GVKEDTNLFE EMMESAKDRM IRSVEELLGG ESLNLGSYEN IHTWLSGVLT 120 SYITCIDGIG EGAYKRRVEP ELEDLYSKAR VALAIFISTS PRDDTELKSV VPNGPSWLSN 180 VDKKYLYLNP EVLKKIADFV VAKDGSGNYN TVNAAIAAAP EHGRKRFVIY IKTGVYDEIV 240 RIGSMKTNLT LIGDGQDSTI ITGNLSCNDG KSTFQTATVV YSFLFFIPNY YILNNHNYTK 300 HTIAASNGDG FIGIDMCFRN TAGPAKGQAV ALRVSGDISV IYRCRIEGYQ DTLYPHRHRQ 360 FYREFFITGT VDFICGNAAA VFQFCQIVAR QPRKGQSNVI TAQSRESEDD NSGFSIQKCN 420 ITTSPDLDLV KATVKTFFGR PWKKYSTVVI LQSFIGDLVD PAGWTPWEGT TGLSTLYYGE 480 YQNMGPGAVT SKRVKWRGFR VLTDPNEAAK LTVSKLLDGK SWLKASGAPY KKGL* 540 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
PLN02745 | PLN02745 | 3.0e-134 | 4 | 534 | 555 | + Putative pectinesterase/pectinesterase inhibitor | ||
PLN02468 | PLN02468 | 9.0e-137 | 108 | 534 | 433 | + putative pectinesterase/pectinesterase inhibitor | ||
pfam01095 | Pectinesterase | 3.0e-178 | 198 | 519 | 322 | + Pectinesterase. | ||
PLN02488 | PLN02488 | 0 | 1 | 534 | 534 | + probable pectinesterase/pectinesterase inhibitor | ||
PLN02301 | PLN02301 | 0 | 1 | 534 | 536 | + pectinesterase/pectinesterase inhibitor |
Gene Ontology | |
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GO Term | Description |
GO:0004857 | enzyme inhibitor activity |
GO:0005618 | cell wall |
GO:0030599 | pectinesterase activity |
GO:0042545 | cell wall modification |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | AAC28220.1 | 0 | 4 | 534 | 20 | 536 | Similar to pectinesterase; T24M8.6 [Arabidopsis thaliana] |
GenBank | AAF16638.1 | 0 | 4 | 534 | 20 | 551 | AC011661_16 T23J18.25 [Arabidopsis thaliana] |
GenBank | ABK28620.1 | 0 | 4 | 534 | 20 | 524 | unknown [Arabidopsis thaliana] |
RefSeq | NP_172625.3 | 0 | 4 | 534 | 20 | 524 | pectin methylesterase, putative [Arabidopsis thaliana] |
RefSeq | NP_192302.3 | 0 | 4 | 534 | 20 | 524 | enzyme inhibitor/ pectinesterase [Arabidopsis thaliana] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1xg2_A | 0 | 196 | 534 | 2 | 315 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
PDB | 1gq8_A | 0 | 198 | 534 | 8 | 319 | A Chain A, Pectin Methylesterase From Carrot |
PDB | 1qjv_B | 0.000000000000005 | 200 | 517 | 7 | 334 | A Chain A, Pectin Methylesterase Pema From Erwinia Chrysanthemi |
PDB | 1qjv_A | 0.000000000000005 | 200 | 517 | 7 | 334 | A Chain A, Pectin Methylesterase Pema From Erwinia Chrysanthemi |
PDB | 2ntq_B | 0.000000000000006 | 200 | 517 | 7 | 334 | A Chain A, Pectin Methylesterase Pema From Erwinia Chrysanthemi |
EST Download unfiltered results here | ||||
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Hit | Length | Start | End | EValue |
HO777316 | 459 | 81 | 535 | 0 |
DV711860 | 341 | 174 | 514 | 0 |
HO778758 | 467 | 77 | 534 | 0 |
DT759654 | 322 | 175 | 496 | 0 |
EB452110 | 304 | 201 | 504 | 0 |
Sequence Alignments (This image is cropped. Click for full image.) |
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