y
Basic Information | |
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Species | Arabidopsis lyrata |
Cazyme ID | 885868 |
Family | GH35 |
Protein Properties | Length: 727 Molecular Weight: 81139.8 Isoelectric Point: 9.0171 |
View CDS |
External Links |
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NCBI Taxonomy |
Plaza |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GH35 | 37 | 340 | 0 |
IINGQRRILLSGSIHYPRSTPEMWPGLIQKAKEGGLDVIETYVFWNGHEPSPGQYYFGDRYDLVKFIKLVHQAGLYVNLRIGPYVCAEWNFGGFPVWLKF VPGMAFRTDNEPFKAAMKKFTEKIVWMMKAEKLFQTQGGPIILAQGQIENEYGPVEWEIGAPGKAYTKWVAQMALGLSTGVPWIMCKQEDAPSPIIDTCN GYYCEDFKPNSSNKPKMWTENWTGWYTEFGGAVPYRPVEDIAYSVARFIQKGGSFVNYYMYHGGTNFDRTAGEFMASSYDYDAPLDEYGLPREPKYSHLK ALHK |
Full Sequence |
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Protein Sequence Length: 727 Download |
MGLNFRDKSW IFLVILCCLS LVCIVKASVS YDRKAVIING QRRILLSGSI HYPRSTPEMW 60 PGLIQKAKEG GLDVIETYVF WNGHEPSPGQ YYFGDRYDLV KFIKLVHQAG LYVNLRIGPY 120 VCAEWNFGGF PVWLKFVPGM AFRTDNEPFK AAMKKFTEKI VWMMKAEKLF QTQGGPIILA 180 QGQIENEYGP VEWEIGAPGK AYTKWVAQMA LGLSTGVPWI MCKQEDAPSP IIDTCNGYYC 240 EDFKPNSSNK PKMWTENWTG WYTEFGGAVP YRPVEDIAYS VARFIQKGGS FVNYYMYHGG 300 TNFDRTAGEF MASSYDYDAP LDEYGLPREP KYSHLKALHK VIKLSEPALL SADATVTSLG 360 AKQEAYVFWS KSSCAAFLSN KDESSAARVM FRGFPYVLPP WSVSILPDCK TEFYNTAKVN 420 APSVHRNMVP TGARFSWGSF NEATPTANEA GTFARNGLVE QISMTWDKSD YFWYLTDITI 480 GSGETFLKTG DFPLFTVMSA GHALHVFVNG QLSGTAYGGL DHPKLTFTQK IKLHAGVNKL 540 ALLSVAVGLP NVGTHFEQWN KGVLGPVTLK GVNSGTWDMS KWKWSYKIGV KGEALSLHTD 600 TESSGVRWTQ GSFVAKKQPL TWYKSTFATP AGNEPLALDM NTMGKGQVWI NGRNIGRHWP 660 AYKAQGSCGR CNYAGTFNAK KCLSNCGEAS QRWYHVPRSW LKSQNLIVVF EEWGGDPNGI 720 SLVKRT* 780 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
pfam02449 | Glyco_hydro_42 | 0.0004 | 51 | 134 | 85 | + Beta-galactosidase. This group of beta-galactosidase enzymes belong to the glycosyl hydrolase 42 family. The enzyme catalyzes the hydrolysis of terminal, non-reducing terminal beta-D-galactosidase residues. | ||
COG1874 | LacA | 1.0e-19 | 29 | 341 | 356 | + Beta-galactosidase [Carbohydrate transport and metabolism] | ||
pfam01301 | Glyco_hydro_35 | 2.0e-152 | 37 | 342 | 322 | + Glycosyl hydrolases family 35. | ||
PLN03059 | PLN03059 | 0 | 27 | 726 | 702 | + beta-galactosidase; Provisional |
Gene Ontology | |
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GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0005975 | carbohydrate metabolic process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | AAK96780.1 | 0 | 1 | 726 | 1 | 724 | beta-galactosidase [Arabidopsis thaliana] |
DDBJ | BAH20357.1 | 0 | 105 | 726 | 1 | 620 | AT5G56870 [Arabidopsis thaliana] |
EMBL | CAB39679.1 | 0 | 1 | 726 | 1 | 727 | putative beta-galactosidase [Arabidopsis thaliana] |
RefSeq | NP_200498.1 | 0 | 1 | 726 | 1 | 724 | BGAL4 (beta-galactosidase 4); beta-galactosidase [Arabidopsis thaliana] |
RefSeq | NP_849553.1 | 0 | 1 | 726 | 1 | 726 | BGAL12 (beta-galactosidase 12); beta-galactosidase/ catalytic/ cation binding [Arabidopsis thaliana] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 3thd_D | 6e-39 | 29 | 346 | 11 | 339 | A Chain A, Solution Structure Of The C-Terminal Domain Ole E 9 |
PDB | 3thd_C | 6e-39 | 29 | 346 | 11 | 339 | A Chain A, Solution Structure Of The C-Terminal Domain Ole E 9 |
PDB | 3thd_B | 6e-39 | 29 | 346 | 11 | 339 | A Chain A, Solution Structure Of The C-Terminal Domain Ole E 9 |