| Basic Information | |
|---|---|
| Species | Arabidopsis lyrata |
| Cazyme ID | 887017 |
| Family | GH5 |
| Protein Properties | Length: 432 Molecular Weight: 48765.3 Isoelectric Point: 9.7912 |
| View CDS | |
| External Links |
|---|
| NCBI Taxonomy |
| Plaza |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| GH5 | 42 | 363 | 9.5e-34 |
| NGYPYYANGFNAYWLMYVASDPSQRSKISTAFQDASRHGLTVARTWAFSDGGYRALQYSPGSYNEDMFQGLDFALAEARRHGIKIILSFANNYESFGGRK QYVDWARSRGRPVSSEDDFFTDSLVKDFYKNHIKAVLNRFNTFTKVHYKDDPTIMAWELMNEPRCPSDPSGRAIQAWITEMAAHVKSLDRNHLLEAGLEG FYGQSSPQSKTLNPPGQFGTDFIANNRIPGIDFVTVHSYPDEWFPDSSEQSQMDFLNKWLDAHIQDAQNVLHKPIILAEFGKSMKKPGYTPAQRDIVFNT VYSKIYGSAKRGGAAAGGLFWQ | |||
| Full Sequence |
|---|
| Protein Sequence Length: 432 Download |
| MKLLCLFLFL AIVIQLSCWE LGADALSSNG FVRTKGVQFS LNGYPYYANG FNAYWLMYVA 60 SDPSQRSKIS TAFQDASRHG LTVARTWAFS DGGYRALQYS PGSYNEDMFQ GLDFALAEAR 120 RHGIKIILSF ANNYESFGGR KQYVDWARSR GRPVSSEDDF FTDSLVKDFY KNHIKAVLNR 180 FNTFTKVHYK DDPTIMAWEL MNEPRCPSDP SGRAIQAWIT EMAAHVKSLD RNHLLEAGLE 240 GFYGQSSPQS KTLNPPGQFG TDFIANNRIP GIDFVTVHSY PDEWFPDSSE QSQMDFLNKW 300 LDAHIQDAQN VLHKPIILAE FGKSMKKPGY TPAQRDIVFN TVYSKIYGSA KRGGAAAGGL 360 FWQLLVNGID NFQDGYGIIL SQSSSTVNVI SQQSRKLTLI RKIFARMINV EKWKRARGRG 420 QVRKRGHNIK N* 480 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| pfam12876 | Cellulase-like | 0.004 | 188 | 280 | 104 | + Sugar-binding cellulase-like. This is a putative cellulase family. | ||
| pfam00150 | Cellulase | 2.0e-6 | 88 | 322 | 239 | + Cellulase (glycosyl hydrolase family 5). | ||
| COG3934 | COG3934 | 6.0e-24 | 35 | 324 | 290 | + Endo-beta-mannanase [Carbohydrate transport and metabolism] | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
| GO:0005975 | carbohydrate metabolic process |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | ABB45852.1 | 0 | 1 | 431 | 1 | 431 | hypothetical protein [Thellungiella halophila] |
| GenBank | ABV32548.1 | 0 | 27 | 431 | 25 | 433 | endo-1,4-beta-mannosidase protein 2 [Prunus persica] |
| GenBank | ACU18982.1 | 0 | 1 | 419 | 1 | 415 | unknown [Glycine max] |
| RefSeq | NP_201447.1 | 0 | 1 | 431 | 1 | 431 | (1-4)-beta-mannan endohydrolase, putative [Arabidopsis thaliana] |
| RefSeq | XP_002281804.1 | 0 | 1 | 431 | 1 | 433 | PREDICTED: hypothetical protein [Vitis vinifera] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 1rh9_A | 0 | 26 | 398 | 1 | 370 | A Chain A, Family Gh5 Endo-Beta-Mannanase From Lycopersicon Esculentum (Tomato) |
| PDB | 3pzq_A | 0 | 41 | 402 | 22 | 378 | A Chain A, Family Gh5 Endo-Beta-Mannanase From Lycopersicon Esculentum (Tomato) |
| PDB | 3pzo_A | 0 | 41 | 402 | 22 | 378 | A Chain A, Family Gh5 Endo-Beta-Mannanase From Lycopersicon Esculentum (Tomato) |
| PDB | 3pzn_A | 0 | 41 | 402 | 22 | 378 | A Chain A, Family Gh5 Endo-Beta-Mannanase From Lycopersicon Esculentum (Tomato) |
| PDB | 3pzm_A | 0 | 41 | 402 | 22 | 378 | A Chain A, Family Gh5 Endo-Beta-Mannanase From Lycopersicon Esculentum (Tomato) |
