| Basic Information | |
|---|---|
| Species | Arabidopsis lyrata |
| Cazyme ID | 887421 |
| Family | GH9 |
| Protein Properties | Length: 502 Molecular Weight: 55410.8 Isoelectric Point: 7.5675 |
| Chromosome | Chromosome/Scaffold: 994 Start: 118 End: 2862 |
| Description | D-arabinono-1,4-lactone oxidase family protein |
| View CDS | |
| External Links |
|---|
| NCBI Taxonomy |
| Plaza |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| GH9 | 43 | 496 | 0 |
| NYKDALSKSILFFEGQRSGKLPPNQRMTWRSNSGLSDGSALNVDLVGGYYDAGDNMKFGFPMAFTTTMLSWSLIEFGGLMKSELPNAKDAVRWATDFLLK ATSHPDTIYVQVGDPNMDHACWERPEDMDTPRSVFKVDKNNPGSDIAGEIAAALAAASIVFGRCDPSYSNLLLQRAITVFTFADKYRGPYSAGLAPEVCP FYCSYSGYQDELLWGAAWLHKATNNPTYLNYIKANGQILGADEFDNMFSWDNKHVGARILLSKEFLIQKVKSLEEYKEHADSFICSVLPGASSSQYTPGG LLFKMGESNMQYVTSTSFLLLTYAKYLTSARTVAYCGGSVVTPARLRSIARKQVDYLLGDNPLKMSYMVGYGLKYPRRIHHRGSSLPSVAVHPTRIQCHD GFSMFTSQSPNPNDLVGAVVGGPDQNDQFPDERSDYGRSEPATYINAPLVGALA | |||
| Full Sequence |
|---|
| Protein Sequence Length: 502 Download |
| MALYLYSSRL IICLSFLLLI TNGFSSSSSR SSIHHRHHLD NHNYKDALSK SILFFEGQRS 60 GKLPPNQRMT WRSNSGLSDG SALNVDLVGG YYDAGDNMKF GFPMAFTTTM LSWSLIEFGG 120 LMKSELPNAK DAVRWATDFL LKATSHPDTI YVQVGDPNMD HACWERPEDM DTPRSVFKVD 180 KNNPGSDIAG EIAAALAAAS IVFGRCDPSY SNLLLQRAIT VFTFADKYRG PYSAGLAPEV 240 CPFYCSYSGY QDELLWGAAW LHKATNNPTY LNYIKANGQI LGADEFDNMF SWDNKHVGAR 300 ILLSKEFLIQ KVKSLEEYKE HADSFICSVL PGASSSQYTP GGLLFKMGES NMQYVTSTSF 360 LLLTYAKYLT SARTVAYCGG SVVTPARLRS IARKQVDYLL GDNPLKMSYM VGYGLKYPRR 420 IHHRGSSLPS VAVHPTRIQC HDGFSMFTSQ SPNPNDLVGA VVGGPDQNDQ FPDERSDYGR 480 SEPATYINAP LVGALACLAR S* 540 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| PLN02266 | PLN02266 | 0 | 1 | 501 | 504 | + endoglucanase | ||
| PLN02308 | PLN02308 | 0 | 41 | 496 | 458 | + endoglucanase | ||
| pfam00759 | Glyco_hydro_9 | 0 | 43 | 496 | 461 | + Glycosyl hydrolase family 9. | ||
| PLN03009 | PLN03009 | 0 | 40 | 499 | 465 | + cellulase | ||
| PLN02613 | PLN02613 | 0 | 39 | 498 | 466 | + endoglucanase | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
| GO:0005975 | carbohydrate metabolic process |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | AAC16418.1 | 0 | 1 | 501 | 1 | 501 | endo-1,4-beta glucanase [Arabidopsis thaliana] |
| RefSeq | NP_171779.1 | 0 | 1 | 501 | 1 | 501 | ATCEL2; cellulase/ hydrolase, hydrolyzing O-glycosyl compounds [Arabidopsis thaliana] |
| RefSeq | NP_192138.1 | 0 | 6 | 501 | 12 | 512 | AtGH9B13 (Arabidopsis thaliana glycosyl hydrolase 9B13); catalytic/ hydrolase, hydrolyzing O-glycosyl compounds |
| RefSeq | XP_002301487.1 | 0 | 10 | 501 | 11 | 507 | glycosyl hydrolase family 9 [Populus trichocarpa] |
| RefSeq | XP_002320998.1 | 0 | 1 | 501 | 1 | 506 | predicted protein [Populus trichocarpa] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 1ksd_A | 0 | 42 | 498 | 3 | 428 | A Chain A, Crystal Structure Of Class V Chitinase (E115q Mutant) From Nicotiana Tobaccum In Complex With Nag4 |
| PDB | 1ksc_A | 0 | 42 | 498 | 3 | 428 | A Chain A, Crystal Structure Of Class V Chitinase (E115q Mutant) From Nicotiana Tobaccum In Complex With Nag4 |
| PDB | 1ks8_A | 0 | 42 | 498 | 3 | 428 | A Chain A, The Structure Of Endoglucanase From Termite, Nasutitermes Takasagoensis, At Ph 2.5. |
| PDB | 4tf4_B | 0 | 43 | 501 | 5 | 443 | A Chain A, The Structure Of Endoglucanase From Termite, Nasutitermes Takasagoensis, At Ph 2.5. |
| PDB | 4tf4_A | 0 | 43 | 501 | 5 | 443 | A Chain A, The Structure Of Endoglucanase From Termite, Nasutitermes Takasagoensis, At Ph 2.5. |
