| Basic Information | |
|---|---|
| Species | Arabidopsis lyrata |
| Cazyme ID | 888134 |
| Family | GH2 |
| Protein Properties | Length: 945 Molecular Weight: 107698 Isoelectric Point: 5.8855 |
| View CDS | |
| External Links |
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| NCBI Taxonomy |
| Plaza |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
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| Family | Start | End | Evalue |
| GH2 | 38 | 724 | 0 |
| SESRWMEAVVPGTVLGTLVKNKAVPDPFYGLENEAITDIADSGRDYYTFWFFTKFQCKWLLNQYVHLNFRAINYSAEVYVNGHKTVLPKGMFRRHTLDVT DILHPENNLLAVIVNPPDHPGTIPPEGGQGGDHEIGKDVAAQYVEGWDWICPIRDRNTGIWDEVSISVTGPVRIIDPHLVSTFFDDYKRAYLHVTAELEN KSTWNADCSVNIQITAELENGVCLVEHLQTENVLIPAQGRIQHTFKPLFFYKPELWWPNGMGKQNLYDILITVDVKEFGESDSWMQPFGFRKIESAIDSV TGGRLFKINGEPIFIRGGNWILSDGLLRLSKERYRTDIKFHADMNMNMIRCWGGGLAERPEFYHFCDIYGLLVWQEFWITGDVDGRGVPVSNPNGPLDHD LFLLCARDTVKLLRNHPSLALWVGGNEQVPPKDINEALKEDLRLHSYFETQLLSDKDSDPSVYLDGTRVYIQGSMWDGFADGKGNFTDGPYEIQYPEDFF KDTYYKYGFNPEVGSVGMPVADTIRATMPPEGWEIPLFKKGLDGFVEEVPNRMWDYHKYIPYSKPGKVHDQILMYGTPENLDDFCLKAQLVNYIQYRALF EGWSSQMWTKYTGVLIWKNQNPWTGLRGQFYDHLLDQTASFYGCRSAAEPVHVQLNLASYFFEVVNTTSKELSDVAIEASVWDLDGN | |||
| Full Sequence |
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| Protein Sequence Length: 945 Download |
| MAEIGKTVLD SGWIAARSTE VDVDGVQLTT TNPPAVSSES RWMEAVVPGT VLGTLVKNKA 60 VPDPFYGLEN EAITDIADSG RDYYTFWFFT KFQCKWLLNQ YVHLNFRAIN YSAEVYVNGH 120 KTVLPKGMFR RHTLDVTDIL HPENNLLAVI VNPPDHPGTI PPEGGQGGDH EIGKDVAAQY 180 VEGWDWICPI RDRNTGIWDE VSISVTGPVR IIDPHLVSTF FDDYKRAYLH VTAELENKST 240 WNADCSVNIQ ITAELENGVC LVEHLQTENV LIPAQGRIQH TFKPLFFYKP ELWWPNGMGK 300 QNLYDILITV DVKEFGESDS WMQPFGFRKI ESAIDSVTGG RLFKINGEPI FIRGGNWILS 360 DGLLRLSKER YRTDIKFHAD MNMNMIRCWG GGLAERPEFY HFCDIYGLLV WQEFWITGDV 420 DGRGVPVSNP NGPLDHDLFL LCARDTVKLL RNHPSLALWV GGNEQVPPKD INEALKEDLR 480 LHSYFETQLL SDKDSDPSVY LDGTRVYIQG SMWDGFADGK GNFTDGPYEI QYPEDFFKDT 540 YYKYGFNPEV GSVGMPVADT IRATMPPEGW EIPLFKKGLD GFVEEVPNRM WDYHKYIPYS 600 KPGKVHDQIL MYGTPENLDD FCLKAQLVNY IQYRALFEGW SSQMWTKYTG VLIWKNQNPW 660 TGLRGQFYDH LLDQTASFYG CRSAAEPVHV QLNLASYFFE VVNTTSKELS DVAIEASVWD 720 LDGNCPYFKV FKIVSAPPKK VVKISEFKYP KAENPKPVYF LLLKLYNVSD KAVISRNFYW 780 LHLPGKDYRL LEPYRKKQIP LTITCNVVMV GPKYELEINV HNTSRADLAK NVVQEDRKRD 840 LGLLQKLFSR CVVSADSNRG LKVVEMKGSD SGVAFFLRFS VHNAETEKQD TRILPVHYSD 900 NYFSLVPGES MSFKISFAAP TGMKKSPRVM LQGWNYPDRF SVFG* |
| Functional Domains Download unfiltered results here | ||||||||
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| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| PRK09525 | lacZ | 9.0e-8 | 193 | 464 | 295 | + beta-D-galactosidase; Reviewed | ||
| PRK10150 | PRK10150 | 1.0e-10 | 22 | 498 | 508 | + beta-D-glucuronidase; Provisional | ||
| pfam00703 | Glyco_hydro_2 | 2.0e-11 | 209 | 328 | 120 | + Glycosyl hydrolases family 2. This family contains beta-galactosidase, beta-mannosidase and beta-glucuronidase activities. | ||
| PRK10340 | ebgA | 7.0e-18 | 96 | 464 | 381 | + cryptic beta-D-galactosidase subunit alpha; Reviewed | ||
| COG3250 | LacZ | 5.0e-42 | 60 | 464 | 411 | + Beta-galactosidase/beta-glucuronidase [Carbohydrate transport and metabolism] | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
| GO:0005975 | carbohydrate metabolic process |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| DDBJ | BAE97370.1 | 0 | 1 | 944 | 1 | 946 | endo-beta-mannosidase [Brassica oleracea] |
| EMBL | CBI36793.1 | 0 | 1 | 943 | 1 | 951 | unnamed protein product [Vitis vinifera] |
| RefSeq | NP_563833.2 | 0 | 1 | 944 | 1 | 944 | glycoside hydrolase family 2 protein [Arabidopsis thaliana] |
| RefSeq | XP_002319539.1 | 0 | 1 | 943 | 1 | 973 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002512381.1 | 0 | 1 | 936 | 1 | 966 | beta-mannosidase, putative [Ricinus communis] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 2vzo_B | 0 | 40 | 935 | 79 | 890 | A Chain A, Crystal Structure Of Amycolatopsis Orientalis Exo- Chitosanase Csxa |
| PDB | 2vzo_A | 0 | 40 | 935 | 79 | 890 | A Chain A, Crystal Structure Of Amycolatopsis Orientalis Exo- Chitosanase Csxa |
| PDB | 2x09_B | 0 | 40 | 935 | 79 | 890 | A Chain A, Crystal Structure Of Amycolatopsis Orientalis Exo- Chitosanase Csxa |
| PDB | 2x09_A | 0 | 40 | 935 | 79 | 890 | A Chain A, Crystal Structure Of Amycolatopsis Orientalis Exo- Chitosanase Csxa |
| PDB | 2x05_B | 0 | 40 | 935 | 79 | 890 | A Chain A, Crystal Structure Of Amycolatopsis Orientalis Exo- Chitosanase Csxa |
| Hydropathy |
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| EST Download unfiltered results here | ||||
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| Hit | Length | Start | End | EValue |
| ES793920 | 376 | 372 | 740 | 0 |
| GO871600 | 333 | 300 | 624 | 0 |
| ES832790 | 305 | 490 | 794 | 0 |
| EX109426 | 264 | 104 | 366 | 0 |
| GO847639 | 325 | 509 | 833 | 0 |
| Sequence Alignments (This image is cropped. Click for full image.) |
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| Phylogeny |
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