| Basic Information | |
|---|---|
| Species | Arabidopsis lyrata |
| Cazyme ID | 889930 |
| Family | GT20 |
| Protein Properties | Length: 868 Molecular Weight: 98588.9 Isoelectric Point: 6.3611 |
| Chromosome | Chromosome/Scaffold: 7 Start: 8645220 End: 8646657 |
| Description | xyloglucan endotransglucosylase/hydrolase 26 |
| View CDS | |
| External Links |
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| NCBI Taxonomy |
| Plaza |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| GT20 | 53 | 546 | 0 |
| SSSSSRERKIIVANMLPLQAKRDTESGQWCFSWDEDSLLLQLRDGFSSDTEFVYIGSLNADIGTSEQEEVSHKLLLDFNCVPTFLPKEMQEKFYLGFCKH HLWPLFHYMLPMFPDHGDRFDRRLWQAYVSANKIFSDRVMEVINPEEDYVWIHDYHLMVLPTFLRKRFNRIKLGFFLHSPFPSSEIYRTLPVRDDLLRGL LNCDLIGFHTFDYARHFLSCCSRMLGLDYESKRGHIGLDYFGRTVFIKILPVGIHMGRLESVLNLPSTAAKMKEIQEQFKGKKLILGVDDMDIFKGISLK LIAMERLFETYWHMRGKLVLIQIVNPARATGKDVEEAKRETYSTVKRINERYGSAGYQPVILIDRLVPRYEKTAYYAMADCCLVNAVRDGMNLVPYKYII CRQGTPGMDKAMGISHDSPRTSMLVVSEFIGCSPSLSGAIRVNPWDVDAVSEAVNLALTMGETEKRLRHEKHYHYVSTHDVGYWAKSFMQDLER | |||
| Full Sequence |
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| Protein Sequence Length: 868 Download |
| MVSRSCANFI DLASWDLLDF PQTQRALPRV MTVPGIISEL DGGYSDGSSD VNSSSSSRER 60 KIIVANMLPL QAKRDTESGQ WCFSWDEDSL LLQLRDGFSS DTEFVYIGSL NADIGTSEQE 120 EVSHKLLLDF NCVPTFLPKE MQEKFYLGFC KHHLWPLFHY MLPMFPDHGD RFDRRLWQAY 180 VSANKIFSDR VMEVINPEED YVWIHDYHLM VLPTFLRKRF NRIKLGFFLH SPFPSSEIYR 240 TLPVRDDLLR GLLNCDLIGF HTFDYARHFL SCCSRMLGLD YESKRGHIGL DYFGRTVFIK 300 ILPVGIHMGR LESVLNLPST AAKMKEIQEQ FKGKKLILGV DDMDIFKGIS LKLIAMERLF 360 ETYWHMRGKL VLIQIVNPAR ATGKDVEEAK RETYSTVKRI NERYGSAGYQ PVILIDRLVP 420 RYEKTAYYAM ADCCLVNAVR DGMNLVPYKY IICRQGTPGM DKAMGISHDS PRTSMLVVSE 480 FIGCSPSLSG AIRVNPWDVD AVSEAVNLAL TMGETEKRLR HEKHYHYVST HDVGYWAKSF 540 MQDLERACRE HYNKRCWGIG FGLSFRVLSL SPSFRKLSID HIVSTYRTTQ RRAIFLDYDG 600 TLVPESSIIK TPNAEVLSVL KSLCGDPKNT VFVVSGRGWE SLSDWLSPCE NLGIAAEHGY 660 FIRWSSKREW ETCYSSAEAE WKTMVEPVMR SYMDATDGST IEFKESALVW HHQEADPDFG 720 ACQAKELLDH LESVLANEPV VVKRGQHIVE VKPQGVSKGL AVEKVIHRMV EDGNPPDMVM 780 CIGDDRSDED MFESILSTVT NPDLPMPPEI FACTVGRKPS KAKYFLDDVS DVLKLLGGLA 840 AASSSRKPED QQQSSSLHTQ VAFESII* 900 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| PLN03063 | PLN03063 | 9.0e-170 | 58 | 834 | 816 | + alpha,alpha-trehalose-phosphate synthase (UDP-forming); Provisional | ||
| PLN02205 | PLN02205 | 0 | 1 | 834 | 839 | + alpha,alpha-trehalose-phosphate synthase [UDP-forming] | ||
| pfam00982 | Glyco_transf_20 | 0 | 59 | 546 | 492 | + Glycosyltransferase family 20. Members of this family belong to glycosyl transferase family 20. OtsA (Trehalose-6-phosphate synthase) is homologous to regions in the subunits of yeast trehalose-6-phosphate synthase/phosphate complex. | ||
| PRK14501 | PRK14501 | 0 | 60 | 834 | 782 | + putative bifunctional trehalose-6-phosphate synthase/HAD hydrolase subfamily IIB; Provisional | ||
| cd03788 | GT1_TPS | 0 | 62 | 545 | 484 | + Trehalose-6-Phosphate Synthase (TPS) is a glycosyltransferase that catalyses the synthesis of alpha,alpha-1,1-trehalose-6-phosphate from glucose-6-phosphate using a UDP-glucose donor. It is a key enzyme in the trehalose synthesis pathway. Trehalose is a nonreducing disaccharide present in a wide variety of organisms and may serve as a source of energy and carbon. It is characterized most notably in insect, plant, and microbial cells. Its production is often associated with a variety of stress conditions, including desiccation, dehydration, heat, cold, and oxidation. This family represents the catalytic domain of the TPS. Some members of this domain family coexist with a C-terminal trehalose phosphatase domain. | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0003824 | catalytic activity |
| GO:0005992 | trehalose biosynthetic process |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | AAC18810.1 | 0 | 31 | 867 | 1 | 826 | Strong similarity to trehalose-6-phosphate synthase homolog from A. thaliana chromosome 4 contig gb |
| GenBank | AAV65494.1 | 0 | 1 | 846 | 1 | 846 | trehalose 6-phosphate synthase [Gossypium hirsutum] |
| RefSeq | NP_173799.1 | 0 | 1 | 867 | 1 | 867 | ATTPS9; transferase, transferring glycosyl groups / trehalose-phosphatase [Arabidopsis thaliana] |
| RefSeq | NP_177186.2 | 0 | 1 | 867 | 1 | 856 | ATTPS8; alpha,alpha-trehalose-phosphate synthase (UDP-forming)/ transferase, transferring glycosyl groups / trehalose-phosphatase [Arabidopsis thaliana] |
| RefSeq | XP_002521023.1 | 0 | 1 | 867 | 1 | 861 | trehalose-6-phosphate synthase, putative [Ricinus communis] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 2wtx_D | 0 | 143 | 546 | 74 | 453 | A Chain A, Insight Into The Mechanism Of Enzymatic Glycosyltransfer With Retention Through The Synthesis And Analysis Of Bisubstrate Glycomimetics Of Trehalose-6-Phosphate Synthase |
| PDB | 2wtx_C | 0 | 143 | 546 | 74 | 453 | A Chain A, Insight Into The Mechanism Of Enzymatic Glycosyltransfer With Retention Through The Synthesis And Analysis Of Bisubstrate Glycomimetics Of Trehalose-6-Phosphate Synthase |
| PDB | 2wtx_B | 0 | 143 | 546 | 74 | 453 | A Chain A, Insight Into The Mechanism Of Enzymatic Glycosyltransfer With Retention Through The Synthesis And Analysis Of Bisubstrate Glycomimetics Of Trehalose-6-Phosphate Synthase |
| PDB | 2wtx_A | 0 | 143 | 546 | 74 | 453 | A Chain A, Insight Into The Mechanism Of Enzymatic Glycosyltransfer With Retention Through The Synthesis And Analysis Of Bisubstrate Glycomimetics Of Trehalose-6-Phosphate Synthase |
| PDB | 1uqu_B | 0 | 143 | 546 | 74 | 453 | A Chain A, Trehalose-6-Phosphate From E. Coli Bound With Udp-Glucose. |
| Hydropathy |
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| EST Download unfiltered results here | ||||
|---|---|---|---|---|
| Hit | Length | Start | End | EValue |
| HO777775 | 768 | 74 | 834 | 0 |
| HO779327 | 514 | 99 | 612 | 0 |
| HO779327 | 259 | 610 | 868 | 0 |
| HO797286 | 458 | 377 | 834 | 0 |
| HO777775 | 78 | 1 | 77 | 0.024 |
| Sequence Alignments (This image is cropped. Click for full image.) |
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