Basic Information | |
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Species | Arabidopsis lyrata |
Cazyme ID | 892433 |
Family | CE8 |
Protein Properties | Length: 587 Molecular Weight: 64054.8 Isoelectric Point: 9.3443 |
View CDS |
External Links |
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NCBI Taxonomy |
Plaza |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
CE8 | 276 | 570 | 0 |
ATVAADGSGDFTTVAAAVAAAPEKSNKRFVIHIKAGVYRENVEVTKKKKNIMFLGDGQGKTIITGSRNVVDGSTTFHSATVAAVGENFLARDITFQNTAG PSKHQAVALRVGSDFSAFYQCDMFAYQDTLYVHSNRQFFVKCHITGTVDFIFGNAAAVLQDCDINARRPNPGQKNMVTAQGRSDPNQNTGIVIQNCRIGG TSDLLAVKGTFPTYLGRPWKEYSRTVIMQSDISDVIRPEGWLEWSGSFALDTLTYREYLNRGGGAGTTNRVTWKGFKVITSDTEAQQFTAGQFIG |
Full Sequence |
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Protein Sequence Length: 587 Download |
MAPIKDFISK FSDFKNNKKL ILSSAAIALL LFATVVGIAA TTNQNKNKKI TTLSSTSHAV 60 LKSVCSSTLY PELCFSTVAA TGGKQLTSQK EVIEASLNLT TKAVKHNYFA VKKLIAKRKG 120 LTPREVTALH DCLETIDETL DELHVAVEDI HQYPKQKSLR KHADDLKTLI SSAITNQGTC 180 LDGFSYDDAD RKVRKVLLKG QVHVEHMCSN ALAMIKNMTE TDIANFELRD KSSSFTNNNN 240 RKLKEVTGDL DSEGWPMWLS VGDRRLLQGS TIKADATVAA DGSGDFTTVA AAVAAAPEKS 300 NKRFVIHIKA GVYRENVEVT KKKKNIMFLG DGQGKTIITG SRNVVDGSTT FHSATVAAVG 360 ENFLARDITF QNTAGPSKHQ AVALRVGSDF SAFYQCDMFA YQDTLYVHSN RQFFVKCHIT 420 GTVDFIFGNA AAVLQDCDIN ARRPNPGQKN MVTAQGRSDP NQNTGIVIQN CRIGGTSDLL 480 AVKGTFPTYL GRPWKEYSRT VIMQSDISDV IRPEGWLEWS GSFALDTLTY REYLNRGGGA 540 GTTNRVTWKG FKVITSDTEA QQFTAGQFIG GGGWLASTGF PFSLSL* |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
PLN02201 | PLN02201 | 5.0e-165 | 124 | 586 | 466 | + probable pectinesterase/pectinesterase inhibitor | ||
PLN02484 | PLN02484 | 5.0e-174 | 57 | 582 | 530 | + probable pectinesterase/pectinesterase inhibitor | ||
PLN02313 | PLN02313 | 0 | 1 | 586 | 587 | + Pectinesterase/pectinesterase inhibitor | ||
pfam01095 | Pectinesterase | 0 | 275 | 571 | 297 | + Pectinesterase. | ||
PLN02301 | PLN02301 | 0 | 55 | 586 | 536 | + pectinesterase/pectinesterase inhibitor |
Gene Ontology | |
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GO Term | Description |
GO:0004857 | enzyme inhibitor activity |
GO:0005618 | cell wall |
GO:0030599 | pectinesterase activity |
GO:0042545 | cell wall modification |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | AAC50023.1 | 0 | 6 | 586 | 1 | 582 | ATPME2 precursor [Arabidopsis thaliana] |
GenBank | AAC72288.1 | 0 | 52 | 586 | 50 | 592 | putative pectin methylesterase [Arabidopsis thaliana] |
EMBL | CAB95025.1 | 0 | 41 | 586 | 42 | 579 | pectin methylesterase [Nicotiana tabacum] |
RefSeq | NP_175786.1 | 0 | 1 | 586 | 1 | 587 | ATPME2; pectinesterase [Arabidopsis thaliana] |
RefSeq | NP_188048.1 | 0 | 52 | 586 | 50 | 592 | ATPME3; pectinesterase [Arabidopsis thaliana] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1gq8_A | 0 | 268 | 586 | 1 | 319 | A Chain A, Pectin Methylesterase From Carrot |
PDB | 1xg2_A | 0 | 272 | 582 | 1 | 311 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
PDB | 1qjv_B | 2e-23 | 286 | 570 | 18 | 335 | A Chain A, Pectin Methylesterase Pema From Erwinia Chrysanthemi |
PDB | 1qjv_A | 2e-23 | 286 | 570 | 18 | 335 | A Chain A, Pectin Methylesterase Pema From Erwinia Chrysanthemi |
PDB | 2ntq_B | 3e-23 | 286 | 570 | 18 | 335 | A Chain A, Pectin Methylesterase Pema From Erwinia Chrysanthemi |