Basic Information | |
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Species | Arabidopsis lyrata |
Cazyme ID | 892826 |
Family | CE8 |
Protein Properties | Length: 353 Molecular Weight: 39430.4 Isoelectric Point: 9.4097 |
View CDS |
External Links |
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NCBI Taxonomy |
Plaza |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
CE8 | 40 | 334 | 0 |
LVVSHNGKGDFKTIQAAMDSIPSSNKNWIKIYLKHGTYNEKIVIPKEKQKIIMQGNNASKVIIQYNDAGLANTSGPIRVDAEYFVAINITFKNTNTRMTP IIPYKAIKVAPSIILAADKAWFYGCTFISVQDTVADLLGRHYFINCYIVGAIDFIWGGGQSIYQNCVIYVKGVTSKKMTKEGGMLEGYITAQGRESEEDK SGFVFKNCLIQGDGKAYLGRAYRNYSRVVFYGTNMSNVVVPRGWDAWDYNDQVHKFTYAEINCTGEGANKKGRVGWEKNLSAKDVKLLIEPKNFI |
Full Sequence |
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Protein Sequence Length: 353 Download |
MKSLKTILAL SFMYFTATTS LVSSYGLEPK DFYKDIAKTL VVSHNGKGDF KTIQAAMDSI 60 PSSNKNWIKI YLKHGTYNEK IVIPKEKQKI IMQGNNASKV IIQYNDAGLA NTSGPIRVDA 120 EYFVAINITF KNTNTRMTPI IPYKAIKVAP SIILAADKAW FYGCTFISVQ DTVADLLGRH 180 YFINCYIVGA IDFIWGGGQS IYQNCVIYVK GVTSKKMTKE GGMLEGYITA QGRESEEDKS 240 GFVFKNCLIQ GDGKAYLGRA YRNYSRVVFY GTNMSNVVVP RGWDAWDYND QVHKFTYAEI 300 NCTGEGANKK GRVGWEKNLS AKDVKLLIEP KNFIDEDGWM ATLPSSLVSL FF* 360 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
PLN02480 | PLN02480 | 2.0e-76 | 38 | 340 | 307 | + Probable pectinesterase | ||
PLN02432 | PLN02432 | 3.0e-79 | 40 | 340 | 302 | + putative pectinesterase | ||
PLN02682 | PLN02682 | 9.0e-81 | 37 | 340 | 318 | + pectinesterase family protein | ||
PLN02176 | PLN02176 | 8.0e-85 | 1 | 344 | 349 | + putative pectinesterase | ||
PLN02497 | PLN02497 | 5.0e-97 | 37 | 344 | 313 | + probable pectinesterase |
Gene Ontology | |
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GO Term | Description |
GO:0005618 | cell wall |
GO:0030599 | pectinesterase activity |
GO:0042545 | cell wall modification |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
EMBL | CBI40838.1 | 0 | 39 | 344 | 44 | 341 | unnamed protein product [Vitis vinifera] |
GenBank | EAY73651.1 | 0 | 36 | 344 | 38 | 334 | hypothetical protein OsI_01540 [Oryza sativa Indica Group] |
RefSeq | XP_002263748.1 | 0 | 39 | 344 | 31 | 328 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002318946.1 | 0 | 34 | 344 | 33 | 338 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002512520.1 | 0 | 10 | 329 | 1 | 316 | Pectinesterase-2 precursor, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1gq8_A | 1.00053e-42 | 36 | 347 | 5 | 317 | A Chain A, Pectin Methylesterase From Carrot |
PDB | 1xg2_A | 4e-26 | 36 | 315 | 1 | 277 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
PDB | 3uw0_A | 1e-16 | 41 | 335 | 34 | 360 | A Chain A, Pectin Methylesterase From Yersinia Enterocolitica |
PDB | 2ntq_B | 0.00000000000004 | 43 | 284 | 12 | 280 | A Chain A, Pectin Methylesterase From Yersinia Enterocolitica |
PDB | 2ntq_A | 0.00000000000004 | 43 | 284 | 12 | 280 | A Chain A, Pectin Methylesterase From Yersinia Enterocolitica |