Basic Information | |
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Species | Arabidopsis lyrata |
Cazyme ID | 892828 |
Family | CE8 |
Protein Properties | Length: 361 Molecular Weight: 40696.6 Isoelectric Point: 8.4111 |
View CDS |
External Links |
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NCBI Taxonomy |
Plaza |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
CE8 | 40 | 333 | 0 |
LVVDHDGTANFKTIQKAINSIPSGNNDWIKIILNPGIYHEKIVIPMEKQKIIMQGNDASKVIIQYNDAGLSNSSGPFTLNAEYFVAINITFMNTYNKRTP IILYEDIKVAPSVILTADKAWFYSCRFISVQDTVADLLGRHYFQNCYIEGAIDFIWGGGQSIYQNCIIHVKRVATKGMLKREQMLAGYITAQGRESEEDT SGFVFNNCVIKGSGKALLGRAYRDYSRVVFYETSMSNIIESRGWDAWDREGQKKKNRDHFTYAEINCIGEGANKRGRVRWEKNLTAEDVKSLIE |
Full Sequence |
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Protein Sequence Length: 361 Download |
MRSLKSLLAF SFLFLTASSL LVSSYRLEPT DFVEDVEKTL VVDHDGTANF KTIQKAINSI 60 PSGNNDWIKI ILNPGIYHEK IVIPMEKQKI IMQGNDASKV IIQYNDAGLS NSSGPFTLNA 120 EYFVAINITF MNTYNKRTPI ILYEDIKVAP SVILTADKAW FYSCRFISVQ DTVADLLGRH 180 YFQNCYIEGA IDFIWGGGQS IYQNCIIHVK RVATKGMLKR EQMLAGYITA QGRESEEDTS 240 GFVFNNCVIK GSGKALLGRA YRDYSRVVFY ETSMSNIIES RGWDAWDREG QKKKNRDHFT 300 YAEINCIGEG ANKRGRVRWE KNLTAEDVKS LIEPKTFING DGWMATLPSS LVSLYLPKLS 360 * |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
PLN02480 | PLN02480 | 5.0e-74 | 38 | 344 | 309 | + Probable pectinesterase | ||
PLN02432 | PLN02432 | 1.0e-81 | 40 | 344 | 305 | + putative pectinesterase | ||
PLN02176 | PLN02176 | 3.0e-82 | 34 | 348 | 315 | + putative pectinesterase | ||
PLN02682 | PLN02682 | 3.0e-84 | 39 | 344 | 317 | + pectinesterase family protein | ||
PLN02497 | PLN02497 | 3.0e-97 | 37 | 348 | 320 | + probable pectinesterase |
Gene Ontology | |
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GO Term | Description |
GO:0005618 | cell wall |
GO:0030599 | pectinesterase activity |
GO:0042545 | cell wall modification |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
EMBL | CBI40838.1 | 0 | 39 | 348 | 44 | 341 | unnamed protein product [Vitis vinifera] |
RefSeq | XP_002263748.1 | 0 | 39 | 348 | 31 | 328 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002277623.1 | 0 | 36 | 348 | 39 | 337 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002512520.1 | 0 | 14 | 333 | 6 | 316 | Pectinesterase-2 precursor, putative [Ricinus communis] |
RefSeq | XP_002529267.1 | 0 | 31 | 349 | 31 | 338 | Pectinesterase-2 precursor, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1gq8_A | 1e-36 | 36 | 351 | 5 | 317 | A Chain A, Pectin Methylesterase From Carrot |
PDB | 1xg2_A | 1e-21 | 41 | 344 | 6 | 304 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
PDB | 3uw0_A | 0.000000000000007 | 50 | 337 | 44 | 358 | A Chain A, Pectin Methylesterase From Yersinia Enterocolitica |
PDB | 2ntq_B | 0.00000000000008 | 50 | 348 | 18 | 342 | A Chain A, Pectin Methylesterase From Yersinia Enterocolitica |
PDB | 2ntq_A | 0.00000000000008 | 50 | 348 | 18 | 342 | A Chain A, Pectin Methylesterase From Yersinia Enterocolitica |