y
Basic Information | |
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Species | Arabidopsis lyrata |
Cazyme ID | 893776 |
Family | CBM43 |
Protein Properties | Length: 479 Molecular Weight: 51975 Isoelectric Point: 4.8049 |
Chromosome | Chromosome/Scaffold: 6 Start: 7714482 End: 7717578 |
Description | protein serine/threonine kinases;protein tyrosine kinases;ATP binding;protein kinases |
View CDS |
External Links |
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NCBI Taxonomy |
Plaza |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
CBM43 | 366 | 447 | 5.6e-24 |
WCTFNPEAKDLTKLAANIDFACTFSDCTALGYGSSCNTLDANGNASYAFNMYFQVKNQDESACFFQGLATITTQNISQGQCN | |||
GH17 | 25 | 343 | 0 |
LGVNWGTMATHKLPPKTVVQMLKDNNINKVKLFDADETTMGALAGSGLEVMVAIPNDQLKVMTSYDRAKDWVRKNVTRYNFDGGVNITFVAVGNEPFLKS YNGSFINLTFPALTNIQNALNEAGLGNSVKATVPLNADVYDSPASNPVPSAGRFRPDIIGQMTQIVDFLGKNNAPITINIYPFLSLYGNDDFPLNYAFFD GAQPINDNGIDYTNVFDANFDTLVSSLKAVGHGDMPIIVGEVGWPTEGDKHANSGNAYRFYNGLLPRLGTNKGTPLRPTYIEVYLFGLLDEDAKSIAPGP FERHWGIFKFDGQPKFPID |
Full Sequence |
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Protein Sequence Length: 479 Download |
MSNLLAIVVG FVIVIGYLGI LVNGLGVNWG TMATHKLPPK TVVQMLKDNN INKVKLFDAD 60 ETTMGALAGS GLEVMVAIPN DQLKVMTSYD RAKDWVRKNV TRYNFDGGVN ITFVAVGNEP 120 FLKSYNGSFI NLTFPALTNI QNALNEAGLG NSVKATVPLN ADVYDSPASN PVPSAGRFRP 180 DIIGQMTQIV DFLGKNNAPI TINIYPFLSL YGNDDFPLNY AFFDGAQPIN DNGIDYTNVF 240 DANFDTLVSS LKAVGHGDMP IIVGEVGWPT EGDKHANSGN AYRFYNGLLP RLGTNKGTPL 300 RPTYIEVYLF GLLDEDAKSI APGPFERHWG IFKFDGQPKF PIDLSGQGQN KLLIGAQNVP 360 YLPNKWCTFN PEAKDLTKLA ANIDFACTFS DCTALGYGSS CNTLDANGNA SYAFNMYFQV 420 KNQDESACFF QGLATITTQN ISQGQCNFPI QIVASSASSF SCSSYSLVLL ILWFLLSG* 480 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
COG5309 | COG5309 | 0.002 | 251 | 335 | 89 | + Exo-beta-1,3-glucanase [Carbohydrate transport and metabolism] | ||
pfam07983 | X8 | 6.0e-16 | 365 | 435 | 78 | + X8 domain. The X8 domain domain contains at least 6 conserved cysteine residues that presumably form three disulphide bridges. The domain is found in an Olive pollen allergen as well as at the C-terminus of several families of glycosyl hydrolases. This domain may be involved in carbohydrate binding. This domain is characteristic of GPI-anchored domains. | ||
smart00768 | X8 | 7.0e-31 | 365 | 448 | 86 | + Possibly involved in carbohydrate binding. The X8 domain, which may be involved in carbohydrate binding, is found in an Olive pollen antigen as well as at the C terminus of family 17 glycosyl hydrolases. It contains 6 conserved cysteine residues which presumably form three disulfide bridges. | ||
pfam00332 | Glyco_hydro_17 | 9.0e-71 | 25 | 343 | 322 | + Glycosyl hydrolases family 17. |
Gene Ontology | |
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GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0005975 | carbohydrate metabolic process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | AAD38251.1 | 0 | 32 | 478 | 1 | 447 | AC006193_7 Similar to glucan endo-1,3-beta-glucosidase precursor [Arabidopsis thaliana] |
GenBank | AAS99718.1 | 0 | 26 | 478 | 26 | 478 | At1g64760 [Arabidopsis thaliana] |
RefSeq | NP_176656.1 | 0 | 26 | 478 | 26 | 478 | glycosyl hydrolase family 17 protein [Arabidopsis thaliana] |
RefSeq | NP_179534.1 | 0 | 3 | 459 | 2 | 455 | glycosyl hydrolase family 17 protein [Arabidopsis thaliana] |
RefSeq | XP_002277003.1 | 0 | 11 | 452 | 10 | 453 | PREDICTED: hypothetical protein [Vitis vinifera] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 3f55_D | 0 | 25 | 345 | 2 | 316 | A Chain A, Structure And Activity Of A Flavonoid 3-O Glucosyltransferase Reveals The Basis For Plant Natural Product Modification |
PDB | 3f55_C | 0 | 25 | 345 | 2 | 316 | A Chain A, Structure And Activity Of A Flavonoid 3-O Glucosyltransferase Reveals The Basis For Plant Natural Product Modification |
PDB | 3f55_B | 0 | 25 | 345 | 2 | 316 | A Chain A, Structure And Activity Of A Flavonoid 3-O Glucosyltransferase Reveals The Basis For Plant Natural Product Modification |
PDB | 3f55_A | 0 | 25 | 345 | 2 | 316 | A Chain A, Structure And Activity Of A Flavonoid 3-O Glucosyltransferase Reveals The Basis For Plant Natural Product Modification |
PDB | 3em5_D | 0 | 25 | 345 | 2 | 316 | A Chain A, Crystal Structure Of A Native Endo Beta-1,3-Glucanase (Hev B 2), A Major Allergen From Hevea Brasiliensis |