| Basic Information | |
|---|---|
| Species | Arabidopsis lyrata |
| Cazyme ID | 894267 |
| Family | CBM43 |
| Protein Properties | Length: 504 Molecular Weight: 54038.1 Isoelectric Point: 5.3528 |
| View CDS | |
| External Links |
|---|
| NCBI Taxonomy |
| Plaza |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| CBM43 | 367 | 448 | 2e-31 |
| CTAREGADPKMLQAALDWACGPGKIDCSPIKQGEACYEPDNVIAHANYAFDTYYHQTGNNPDACNFNGVASITTTDPSHGTC | |||
| GH17 | 29 | 348 | 0 |
| IGVNIGTDLSDMPHPTQVVSLLKAQQIRHIRLYDADPGMLIALANTGIKVIISIPNDQLLGIGQSNSTAANWVKRNVIAHYPATTITAISVGSEVLTSLS NAAPVLVSAIKNVHAALLSSNLDRLIKVSTPLSTSLILDPFPPSQAFFNRSLNSVIVPLLSFLQSTNSYLMMNVYPYYDYMQSNGVIPLDYALFKPIPPN KEAVDANTLVRYSNAFDAMVDATYFAMAYLNFTNIPVLVTESGWPSKGETNEPDATLDNANTYNSNLIRHVLNKTGTPKRPGIAVSTYIYELYNEDIKAG SLSEKNWGLFNANGDPVYVL | |||
| Full Sequence |
|---|
| Protein Sequence Length: 504 Download |
| MAPLLLLSLS LLALASASPS PPADEGSYIG VNIGTDLSDM PHPTQVVSLL KAQQIRHIRL 60 YDADPGMLIA LANTGIKVII SIPNDQLLGI GQSNSTAANW VKRNVIAHYP ATTITAISVG 120 SEVLTSLSNA APVLVSAIKN VHAALLSSNL DRLIKVSTPL STSLILDPFP PSQAFFNRSL 180 NSVIVPLLSF LQSTNSYLMM NVYPYYDYMQ SNGVIPLDYA LFKPIPPNKE AVDANTLVRY 240 SNAFDAMVDA TYFAMAYLNF TNIPVLVTES GWPSKGETNE PDATLDNANT YNSNLIRHVL 300 NKTGTPKRPG IAVSTYIYEL YNEDIKAGSL SEKNWGLFNA NGDPVYVLRL TNSGSVLAND 360 TTNQTYCTAR EGADPKMLQA ALDWACGPGK IDCSPIKQGE ACYEPDNVIA HANYAFDTYY 420 HQTGNNPDAC NFNGVASITT TDPSHGTCVF AGSRGNGKNG TSVNITAPSA NSTTSSGIRS 480 DLYYSRGIWS ILTVMILNVA NIL* 540 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| COG5309 | COG5309 | 2.0e-10 | 58 | 341 | 297 | + Exo-beta-1,3-glucanase [Carbohydrate transport and metabolism] | ||
| pfam07983 | X8 | 5.0e-19 | 365 | 437 | 78 | + X8 domain. The X8 domain domain contains at least 6 conserved cysteine residues that presumably form three disulphide bridges. The domain is found in an Olive pollen allergen as well as at the C-terminus of several families of glycosyl hydrolases. This domain may be involved in carbohydrate binding. This domain is characteristic of GPI-anchored domains. | ||
| smart00768 | X8 | 2.0e-39 | 365 | 450 | 86 | + Possibly involved in carbohydrate binding. The X8 domain, which may be involved in carbohydrate binding, is found in an Olive pollen antigen as well as at the C terminus of family 17 glycosyl hydrolases. It contains 6 conserved cysteine residues which presumably form three disulfide bridges. | ||
| pfam00332 | Glyco_hydro_17 | 2.0e-91 | 29 | 346 | 318 | + Glycosyl hydrolases family 17. | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
| GO:0005975 | carbohydrate metabolic process |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | AAG51762.1 | 0 | 40 | 444 | 1 | 404 | AC066691_2 beta-1,3-glucanase precursor, putative; 34016-35272 [Arabidopsis thaliana] |
| GenBank | ABI93926.1 | 0 | 14 | 503 | 17 | 505 | At1g66250 [Arabidopsis thaliana] |
| RefSeq | NP_176799.2 | 0 | 14 | 503 | 17 | 505 | glycosyl hydrolase family 17 protein [Arabidopsis thaliana] |
| RefSeq | XP_002265396.1 | 0 | 23 | 476 | 16 | 468 | PREDICTED: hypothetical protein [Vitis vinifera] |
| RefSeq | XP_002531922.1 | 0 | 25 | 475 | 30 | 479 | Glucan endo-1,3-beta-glucosidase precursor, putative [Ricinus communis] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 2cyg_A | 0 | 29 | 350 | 1 | 312 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
| PDB | 3ur8_B | 0 | 29 | 350 | 3 | 314 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
| PDB | 3ur8_A | 0 | 29 | 350 | 3 | 314 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
| PDB | 3ur7_B | 0 | 29 | 350 | 3 | 314 | A Chain A, Higher-density Crystal Structure Of Potato Endo-1,3-beta-glucanase |
| PDB | 3ur7_A | 0 | 29 | 350 | 3 | 314 | A Chain A, Higher-density Crystal Structure Of Potato Endo-1,3-beta-glucanase |
