| Basic Information | |
|---|---|
| Species | Arabidopsis lyrata |
| Cazyme ID | 894829 |
| Family | GT20 |
| Protein Properties | Length: 857 Molecular Weight: 97477 Isoelectric Point: 5.6417 |
| Chromosome | Chromosome/Scaffold: 6 Start: 14344356 End: 14345348 |
| Description | D-aminoacid aminotransferase-like PLP-dependent enzymes superfamily protein |
| View CDS | |
| External Links |
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| NCBI Taxonomy |
| Plaza |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| GT20 | 56 | 541 | 0 |
| SRERKIIVANMLPLQSKRDTETGKWCFHWDEDSLQLQLRDGFSSETEFLYVGSLNVDIETSEQEEVSQRLLEEFNCVATFLSQELQEMFYLGFCKHQLWP LFHYMLPMFPDHGDRFDRRLWQAYVSANKIFSDRVMEVINPEDDYVWIQDYHLMVLPTFLRKRFNRIKLGFFLHSPFPSSEIYRTLPVRDEILRGLLNCD LIGFHTFDYARHFLSCCSRMLGLDYESKRGHIGLDYFGRTVYIKILPVGVHMGRLESVLNLDSTAAKTKEIQEQFKGKKLVLGIDDMDIFKGISLKLIAM EHLFETYWHLRGKVVLVQIVNPARSSGKDVEEAKRETYVTAKRINERYGTSDYKPIVLIDRLVPRSEKTAYYAAADCCLVNAVRDGMNLVPYKYIVCREG TRNKALDDSSPRTSTLVVSEFIGCSPSLSGAIRVNPWDVDAVAEAVNSALKMSETEKQLRHEKHYHYISTHDVGYWAKSFMQDLER | |||
| Full Sequence |
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| Protein Sequence Length: 857 Download |
| MVSRSCANFL DISSWDLLDF PQTPRTLPRF MTVPGIITDV DGGDITSEVT SSSGGSRERK 60 IIVANMLPLQ SKRDTETGKW CFHWDEDSLQ LQLRDGFSSE TEFLYVGSLN VDIETSEQEE 120 VSQRLLEEFN CVATFLSQEL QEMFYLGFCK HQLWPLFHYM LPMFPDHGDR FDRRLWQAYV 180 SANKIFSDRV MEVINPEDDY VWIQDYHLMV LPTFLRKRFN RIKLGFFLHS PFPSSEIYRT 240 LPVRDEILRG LLNCDLIGFH TFDYARHFLS CCSRMLGLDY ESKRGHIGLD YFGRTVYIKI 300 LPVGVHMGRL ESVLNLDSTA AKTKEIQEQF KGKKLVLGID DMDIFKGISL KLIAMEHLFE 360 TYWHLRGKVV LVQIVNPARS SGKDVEEAKR ETYVTAKRIN ERYGTSDYKP IVLIDRLVPR 420 SEKTAYYAAA DCCLVNAVRD GMNLVPYKYI VCREGTRNKA LDDSSPRTST LVVSEFIGCS 480 PSLSGAIRVN PWDVDAVAEA VNSALKMSET EKQLRHEKHY HYISTHDVGY WAKSFMQDLE 540 RACRDHYSKR CWGIGFGLGF RVLSLSPSFR KLSVENIVPV YRKTQRRAIF LDYDGTLVPE 600 SSIVQDPSAE VVSVLKALCE DPNNTVFIVS GRGKESLSNW LSPCENLGIA AEHGYFIRWN 660 SKDEWETCYS PSDTEWRSLV EPVMRSYMEA TDGTSIEFKE SALVWHHQDA DPDFGSCQAK 720 EMLDHLESVL ANEPVVVKRG QHIVEVKPQG VSKGLAAEKV IRGMVERGEP PEMVMCIGDD 780 RSDEDMFESI LSTVTNPELL VQPEVFACTV GRKPSKAKYF LDDEADVLKL LRGLGDSSSS 840 LKPTSSHTQV SFESIV* 900 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| PLN03063 | PLN03063 | 1.0e-161 | 55 | 827 | 814 | + alpha,alpha-trehalose-phosphate synthase (UDP-forming); Provisional | ||
| PLN02205 | PLN02205 | 0 | 1 | 827 | 837 | + alpha,alpha-trehalose-phosphate synthase [UDP-forming] | ||
| pfam00982 | Glyco_transf_20 | 0 | 58 | 541 | 488 | + Glycosyltransferase family 20. Members of this family belong to glycosyl transferase family 20. OtsA (Trehalose-6-phosphate synthase) is homologous to regions in the subunits of yeast trehalose-6-phosphate synthase/phosphate complex. | ||
| PRK14501 | PRK14501 | 0 | 59 | 827 | 775 | + putative bifunctional trehalose-6-phosphate synthase/HAD hydrolase subfamily IIB; Provisional | ||
| cd03788 | GT1_TPS | 0 | 61 | 540 | 480 | + Trehalose-6-Phosphate Synthase (TPS) is a glycosyltransferase that catalyses the synthesis of alpha,alpha-1,1-trehalose-6-phosphate from glucose-6-phosphate using a UDP-glucose donor. It is a key enzyme in the trehalose synthesis pathway. Trehalose is a nonreducing disaccharide present in a wide variety of organisms and may serve as a source of energy and carbon. It is characterized most notably in insect, plant, and microbial cells. Its production is often associated with a variety of stress conditions, including desiccation, dehydration, heat, cold, and oxidation. This family represents the catalytic domain of the TPS. Some members of this domain family coexist with a C-terminal trehalose phosphatase domain. | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0003824 | catalytic activity |
| GO:0005992 | trehalose biosynthetic process |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | AAC18810.1 | 0 | 31 | 856 | 1 | 826 | Strong similarity to trehalose-6-phosphate synthase homolog from A. thaliana chromosome 4 contig gb |
| GenBank | AAV65494.1 | 0 | 1 | 854 | 1 | 859 | trehalose 6-phosphate synthase [Gossypium hirsutum] |
| RefSeq | NP_173799.1 | 0 | 1 | 856 | 1 | 867 | ATTPS9; transferase, transferring glycosyl groups / trehalose-phosphatase [Arabidopsis thaliana] |
| RefSeq | NP_177186.2 | 0 | 1 | 856 | 1 | 856 | ATTPS8; alpha,alpha-trehalose-phosphate synthase (UDP-forming)/ transferase, transferring glycosyl groups / trehalose-phosphatase [Arabidopsis thaliana] |
| RefSeq | XP_002521023.1 | 0 | 1 | 856 | 1 | 861 | trehalose-6-phosphate synthase, putative [Ricinus communis] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 2wtx_D | 0 | 114 | 541 | 45 | 453 | A Chain A, Insight Into The Mechanism Of Enzymatic Glycosyltransfer With Retention Through The Synthesis And Analysis Of Bisubstrate Glycomimetics Of Trehalose-6-Phosphate Synthase |
| PDB | 2wtx_C | 0 | 114 | 541 | 45 | 453 | A Chain A, Insight Into The Mechanism Of Enzymatic Glycosyltransfer With Retention Through The Synthesis And Analysis Of Bisubstrate Glycomimetics Of Trehalose-6-Phosphate Synthase |
| PDB | 2wtx_B | 0 | 114 | 541 | 45 | 453 | A Chain A, Insight Into The Mechanism Of Enzymatic Glycosyltransfer With Retention Through The Synthesis And Analysis Of Bisubstrate Glycomimetics Of Trehalose-6-Phosphate Synthase |
| PDB | 2wtx_A | 0 | 114 | 541 | 45 | 453 | A Chain A, Insight Into The Mechanism Of Enzymatic Glycosyltransfer With Retention Through The Synthesis And Analysis Of Bisubstrate Glycomimetics Of Trehalose-6-Phosphate Synthase |
| PDB | 1gz5_D | 0 | 114 | 541 | 44 | 452 | A Chain A, Trehalose-6-Phosphate Synthase. Otsa |
| Hydropathy |
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| EST Download unfiltered results here | ||||
|---|---|---|---|---|
| Hit | Length | Start | End | EValue |
| HO777775 | 758 | 80 | 827 | 0 |
| HO779327 | 515 | 98 | 608 | 0 |
| HO779327 | 251 | 607 | 857 | 0 |
| HO797286 | 458 | 376 | 827 | 0 |
| HO777775 | 78 | 1 | 76 | 0.15 |
| Sequence Alignments (This image is cropped. Click for full image.) |
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