| Basic Information | |
|---|---|
| Species | Arabidopsis lyrata |
| Cazyme ID | 894888 |
| Family | GH9 |
| Protein Properties | Length: 493 Molecular Weight: 54612.4 Isoelectric Point: 9.5971 |
| Chromosome | Chromosome/Scaffold: 6 Start: 17723096 End: 17723299 |
| Description | |
| View CDS | |
| External Links |
|---|
| NCBI Taxonomy |
| Plaza |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| GH9 | 28 | 482 | 0 |
| DYRDALRKSILFFEGQRSGKLPPDQRLKWRRDSALRDGSSAGVDLSGGYYDAGDNIKFGFPMAFTTTMLSWSIIDFGKTMGPELKNAVKAVKWGTDYLLK ATAIPGVVFVQVGDAYSDHNCWERPEDMDTLRTVYKIDRAHPGSDVAGETAAALAAASIVFRKRDPSYSRLLLDRATRVFAFANRYRGAYSNSLYHAVCP FYCDFNGYQDELLWGAAWLHKASRKRAYREFIVKNEVILKAGDTINEFGWDNKHAGINVLISKEVLMGKAEYFESFKQNADGFICSILPGISHPQVQYSR GGLLVKTGGSNMQHVTSLSFLLLAYSNYLSHAKKVVPCGELTASPSLLRQIAKRQVDYILGDNPMGLSYMVGYGQKFPRRIHHRGSSVPSVSVHPSHIGC KEGSRYFLSPNPNPNLLVGAVVGGPNVTDAFPDSRPYFQQSEPTTYINAPLVGLL | |||
| Full Sequence |
|---|
| Protein Sequence Length: 493 Download |
| MARKSLIFPV ILLAVLLFSP PIYSAGHDYR DALRKSILFF EGQRSGKLPP DQRLKWRRDS 60 ALRDGSSAGV DLSGGYYDAG DNIKFGFPMA FTTTMLSWSI IDFGKTMGPE LKNAVKAVKW 120 GTDYLLKATA IPGVVFVQVG DAYSDHNCWE RPEDMDTLRT VYKIDRAHPG SDVAGETAAA 180 LAAASIVFRK RDPSYSRLLL DRATRVFAFA NRYRGAYSNS LYHAVCPFYC DFNGYQDELL 240 WGAAWLHKAS RKRAYREFIV KNEVILKAGD TINEFGWDNK HAGINVLISK EVLMGKAEYF 300 ESFKQNADGF ICSILPGISH PQVQYSRGGL LVKTGGSNMQ HVTSLSFLLL AYSNYLSHAK 360 KVVPCGELTA SPSLLRQIAK RQVDYILGDN PMGLSYMVGY GQKFPRRIHH RGSSVPSVSV 420 HPSHIGCKEG SRYFLSPNPN PNLLVGAVVG GPNVTDAFPD SRPYFQQSEP TTYINAPLVG 480 LLGYFSAHSS WR* 540 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| PLN02308 | PLN02308 | 0 | 1 | 492 | 492 | + endoglucanase | ||
| PLN02266 | PLN02266 | 0 | 25 | 490 | 466 | + endoglucanase | ||
| PLN03009 | PLN03009 | 0 | 7 | 490 | 487 | + cellulase | ||
| pfam00759 | Glyco_hydro_9 | 0 | 28 | 483 | 462 | + Glycosyl hydrolase family 9. | ||
| PLN02171 | PLN02171 | 0 | 1 | 487 | 495 | + endoglucanase | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
| GO:0005975 | carbohydrate metabolic process |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| EMBL | CAA67156.1 | 0 | 27 | 492 | 27 | 493 | endo-1,4-beta-glucanase [Arabidopsis thaliana] |
| EMBL | CAA67157.1 | 0 | 1 | 492 | 1 | 492 | endo-1,4-beta-glucanase [Arabidopsis thaliana] |
| RefSeq | NP_173735.1 | 0 | 1 | 488 | 1 | 488 | AtGH9B6 (Arabidopsis thaliana glycosyl hydrolase 9B6); catalytic/ hydrolase, hydrolyzing O-glycosyl compounds |
| RefSeq | NP_177228.1 | 0 | 27 | 492 | 27 | 492 | ATGH9B1 (ARABIDOPSIS THALIANA GLYCOSYL HYDROLASE 9B1); cellulase/ hydrolase, hydrolyzing O-glycosyl compounds [Arabidopsis thaliana] |
| RefSeq | XP_002527779.1 | 0 | 11 | 489 | 14 | 492 | endo-1,4-beta-glucanase, putative [Ricinus communis] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 1ksd_A | 0 | 27 | 482 | 3 | 425 | A Chain A, Crystal Structure Of Chondroitin Polymerase From Escherichia Coli Strain K4 (K4cp) Complexed With Udp-Glcua And Udp |
| PDB | 1ksc_A | 0 | 27 | 482 | 3 | 425 | A Chain A, Crystal Structure Of Chondroitin Polymerase From Escherichia Coli Strain K4 (K4cp) Complexed With Udp-Glcua And Udp |
| PDB | 1ks8_A | 0 | 27 | 482 | 3 | 425 | A Chain A, The Structure Of Endoglucanase From Termite, Nasutitermes Takasagoensis, At Ph 2.5. |
| PDB | 4tf4_B | 0 | 28 | 476 | 5 | 431 | A Chain A, The Structure Of Endoglucanase From Termite, Nasutitermes Takasagoensis, At Ph 2.5. |
| PDB | 4tf4_A | 0 | 28 | 476 | 5 | 431 | A Chain A, The Structure Of Endoglucanase From Termite, Nasutitermes Takasagoensis, At Ph 2.5. |
