| Basic Information | |
|---|---|
| Species | Arabidopsis lyrata |
| Cazyme ID | 896781 |
| Family | GH100 |
| Protein Properties | Length: 657 Molecular Weight: 73893.5 Isoelectric Point: 7.9747 |
| Chromosome | Chromosome/Scaffold: 5 Start: 4765342 End: 4765710 |
| Description | ankyrin repeat family protein |
| View CDS | |
| External Links |
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| NCBI Taxonomy |
| Plaza |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| GH100 | 168 | 628 | 0 |
| QTEVEKEAWKLLRGAVVNYCGFPVGTVAANDPVDTQTLNYDQVFIRDFVPSAYAFMLDGEGEIVRNFLLYTLQLQSWEKTVDCHSPGPGLIPASFKVKSG PLEGNDGSFEEFLDPDFGGSAIGRVSPVDSGLWWIILLRAYGKLTGDYTLQERIDVQTGIKLILKLCLADGFDMFPTLLVTDGSCMIDRRMGIHGHPLEI QALFYSALRCAREMLIVNDGTKNLVAAVNNRLSALSFHIREYYWVDIKKINEIYRYNTEEYSADATNKFNIYPDQIPTWLVDWIPEKGGYFIGNLQPAHM DFRFFTLGNLWAVISSLGNQEQNEGVMTLIEEKWDDLVANMPLKICFPALEKDEWRIITGSDPKNMPWSYHNGGSWPTLLWQFTLACIKMGRLELAKKAV AVAEKRLKEDEWPEYYDTKNGRFVGKQSRLYQTWTIAGFLAAKKLIEQPEKASLLFWEEDY | |||
| Full Sequence |
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| Protein Sequence Length: 657 Download |
| MNSRSCICVS AMKPCCRFLI SFTSSSLFGG KFISSSKLRC TKIDSRSIRS GIHCRRIVLD 60 RDGFCDSDSI SWGGGGSRVL RARGSRGRGR GVLAIPRVAS DFRNHSTSSL DSHVNDKSFE 120 SMFVKPLVFK DVEKTERIPK RESGNGGGQD ANFGNVGVRK EPERGLSQTE VEKEAWKLLR 180 GAVVNYCGFP VGTVAANDPV DTQTLNYDQV FIRDFVPSAY AFMLDGEGEI VRNFLLYTLQ 240 LQSWEKTVDC HSPGPGLIPA SFKVKSGPLE GNDGSFEEFL DPDFGGSAIG RVSPVDSGLW 300 WIILLRAYGK LTGDYTLQER IDVQTGIKLI LKLCLADGFD MFPTLLVTDG SCMIDRRMGI 360 HGHPLEIQAL FYSALRCARE MLIVNDGTKN LVAAVNNRLS ALSFHIREYY WVDIKKINEI 420 YRYNTEEYSA DATNKFNIYP DQIPTWLVDW IPEKGGYFIG NLQPAHMDFR FFTLGNLWAV 480 ISSLGNQEQN EGVMTLIEEK WDDLVANMPL KICFPALEKD EWRIITGSDP KNMPWSYHNG 540 GSWPTLLWQF TLACIKMGRL ELAKKAVAVA EKRLKEDEWP EYYDTKNGRF VGKQSRLYQT 600 WTIAGFLAAK KLIEQPEKAS LLFWEEDYQL LETCVCGLSK SSGRKNKCSR FTPPRS* 660 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| pfam06202 | GDE_C | 0.008 | 256 | 381 | 146 | + Amylo-alpha-1,6-glucosidase. This family includes human glycogen branching enzyme. This enzyme contains a number of distinct catalytic activities. It has been shown for the yeast homologue that mutations in this region disrupt the enzymes Amylo-alpha-1,6-glucosidase (EC:3.2.1.33). | ||
| pfam12899 | Glyco_hydro_100 | 0 | 174 | 616 | 443 | + Alkaline and neutral invertase. This is a family of bacterial and plant alkaline and neutral invertases, EC:3.2.1.26, previously known as Invertase_neut pfam04853. | ||
| PLN02703 | PLN02703 | 0 | 162 | 645 | 488 | + beta-fructofuranosidase | ||
| PLN03005 | PLN03005 | 0 | 174 | 630 | 457 | + beta-fructofuranosidase | ||
| PLN02973 | PLN02973 | 0 | 159 | 630 | 473 | + beta-fructofuranosidase | ||
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | AAG51337.1 | 0 | 122 | 656 | 1 | 536 | AC020580_17 neutral invertase, putative; 73674-70896 [Arabidopsis thaliana] |
| GenBank | AAP40464.1 | 0 | 1 | 656 | 1 | 664 | putative neutral invertase [Arabidopsis thaliana] |
| DDBJ | BAE98459.1 | 0 | 1 | 656 | 1 | 664 | putative neutral invertase [Arabidopsis thaliana] |
| RefSeq | NP_187302.2 | 0 | 1 | 656 | 1 | 664 | beta-fructofuranosidase, putative / invertase, putative / saccharase, putative / beta-fructosidase, putative [Arabidopsis thaliana] |
| RefSeq | XP_002519277.1 | 0 | 1 | 652 | 1 | 679 | beta-fructofuranosidase, putative [Ricinus communis] |
| Hydropathy |
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| EST Download unfiltered results here | ||||
|---|---|---|---|---|
| Hit | Length | Start | End | EValue |
| HO811217 | 479 | 169 | 647 | 0 |
| HO466454 | 466 | 173 | 638 | 0 |
| HO779905 | 398 | 250 | 646 | 0 |
| EL455256 | 311 | 169 | 479 | 0 |
| DV161952 | 313 | 245 | 557 | 0 |
| Sequence Alignments (This image is cropped. Click for full image.) |
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