| Basic Information | |
|---|---|
| Species | Arabidopsis lyrata |
| Cazyme ID | 897617 |
| Family | GH35 |
| Protein Properties | Length: 848 Molecular Weight: 93714.8 Isoelectric Point: 8.5955 |
| View CDS | |
| External Links |
|---|
| NCBI Taxonomy |
| Plaza |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| GH35 | 42 | 344 | 0 |
| TINGKRRILISGSIHYPRSTPEMWPDLIRKAKEGGLDVIQTYVFWNGHEPSPGKYYFEGNYDLVRFVKLVQQSGLYLHLRIGPYVCAEWNFGGFPVWLKY IPGISFRTDNGPFKAQMQRFTTKIVNMMKAERLFESQGGPIILSQIENEYGPMEYELGAPGRSYTNWAAKMAVGLGTGVPWVMCKQDDAPDPIINACNGF YCDYFSPNKAYKPKMWTEAWTGWFTKFGGPVPYRPAEDMAFSVARFIQKGGSFINYYMYHGGTNFGRTAGGPFIATSYDYDAPLDEYGLERQPKWGHLKD LHR | |||
| Full Sequence |
|---|
| Protein Sequence Length: 848 Download |
| MGLKPNAMKN VVAMAAVSAL FLLGFLVCSV SGSVSYDSRA ITINGKRRIL ISGSIHYPRS 60 TPEMWPDLIR KAKEGGLDVI QTYVFWNGHE PSPGKYYFEG NYDLVRFVKL VQQSGLYLHL 120 RIGPYVCAEW NFGGFPVWLK YIPGISFRTD NGPFKAQMQR FTTKIVNMMK AERLFESQGG 180 PIILSQIENE YGPMEYELGA PGRSYTNWAA KMAVGLGTGV PWVMCKQDDA PDPIINACNG 240 FYCDYFSPNK AYKPKMWTEA WTGWFTKFGG PVPYRPAEDM AFSVARFIQK GGSFINYYMY 300 HGGTNFGRTA GGPFIATSYD YDAPLDEYGL ERQPKWGHLK DLHRAIKLCE PALVSGEPTR 360 MPLGNYQEAH VYKAKSGACS AFLANYNPKS YAKVSFGSNH YNLPPWSISI LPDCKNTVYN 420 TARVGAQTSR MKMVRVPVHG GLSWQAYNED PSTYIDESFT MVGLVEQINT TRDTSDYLWY 480 MTDVKIDANE GFLRNGDLPT LTVLSAGHAM HVFINGQLSG SAYGSLDSPK LTFRKGVNLR 540 AGFNKIAILS IAVGLPNVGP HFETWNAGVL GPVSLNGLSG GRRDLSWQKW TYKVGLKGES 600 LSLHSLSGSS SVEWAEGAFV AQKQPLTWYK TTFSAPAGDS PLAVDMGSMG KGQIWINGQS 660 LGRHWPAYKA VGSCSECSYT GTFREDKCLR NCGEASQRWY HVPRSWLKPS GNLLVVFEEW 720 GGDPNGISLV RREVDSVCAD IYEWQSTLVN YQLHASGKVN KPLHPKVHLQ CGPGQKITTV 780 KFASFGTPEG TCGSYRQGSC HDHHSYDAFN KLCVGQNWCS VTVAPEMFGG DPCPNVMKKL 840 AVEAVCA* |
| Functional Domains Download unfiltered results here | ||||||
|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description |
| pfam02449 | Glyco_hydro_42 | 2.0e-6 | 56 | 192 | 152 | + Beta-galactosidase. This group of beta-galactosidase enzymes belong to the glycosyl hydrolase 42 family. The enzyme catalyzes the hydrolysis of terminal, non-reducing terminal beta-D-galactosidase residues. |
| pfam02140 | Gal_Lectin | 8.0e-22 | 769 | 846 | 82 | + Galactose binding lectin domain. |
| COG1874 | LacA | 2.0e-24 | 34 | 336 | 372 | + Beta-galactosidase [Carbohydrate transport and metabolism] |
| pfam01301 | Glyco_hydro_35 | 3.0e-164 | 40 | 346 | 323 | + Glycosyl hydrolases family 35. |
| PLN03059 | PLN03059 | 0 | 20 | 847 | 833 | + beta-galactosidase; Provisional |
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
| GO:0005529 | Interacting selectively and non-covalently with any carbohydrate, which includes monosaccharides, oligosaccharides and polysaccharides as well as substances derived from monosaccharides by reduction of the carbonyl group (alditols), by oxidation of one or more hydroxy groups to afford the corresponding aldehydes, ketones, or carboxylic acids, or by replacement of one or more hydroxy group(s) by a hydrogen atom. Cyclitols are generally not regarded as carbohydrates." [CHEBI:16646, GOC:mah] |
| GO:0005975 | carbohydrate metabolic process |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | AAM13196.1 | 0 | 1 | 847 | 1 | 847 | galactosidase, putative [Arabidopsis thaliana] |
| GenBank | ABK96254.1 | 0 | 1 | 847 | 1 | 846 | unknown [Populus trichocarpa x Populus deltoides] |
| RefSeq | NP_187988.1 | 0 | 1 | 847 | 1 | 847 | BGAL1 (Beta galactosidase 1); beta-galactosidase/ catalytic/ cation binding / heme binding / peroxidase/ sugar binding [Arabidopsis thaliana] |
| RefSeq | XP_002327432.1 | 0 | 27 | 847 | 19 | 839 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002527409.1 | 0 | 3 | 847 | 1 | 845 | beta-galactosidase, putative [Ricinus communis] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 3d3a_A | 1.4013e-45 | 31 | 342 | 5 | 325 | A Chain A, Crystal Structure Of A Beta-Galactosidase From Bacteroides Thetaiotaomicron |
| PDB | 3d3a_A | 0.003 | 500 | 718 | 399 | 572 | A Chain A, Crystal Structure Of A Beta-Galactosidase From Bacteroides Thetaiotaomicron |
| PDB | 3thd_D | 6.00036e-42 | 33 | 416 | 10 | 405 | A Chain A, Crystal Structure Of A Beta-Galactosidase From Bacteroides Thetaiotaomicron |
| PDB | 3thd_C | 6.00036e-42 | 33 | 416 | 10 | 405 | A Chain A, Crystal Structure Of A Beta-Galactosidase From Bacteroides Thetaiotaomicron |
